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置顶我用R语言做的后端，项目自动生成的Dockerfile，但是在云托管上部署出错，能麻烦工程师看一吗？精选热门

2022-04-06745浏览问题模块：开放讨论问题

提交工单，并在问题描述中附上以下信息：环境id：prod-2gackdamca3d0f56；服务名称：covid-sh；版本：covid-sh-001；状态：构建失败。

部署开始于 2022-04-06 14:38:38

AppID: wxa793b35d8869baa2

环境名称：prod-2gackdamca3d0f56

[1/2] 创建版本　　　　进行中预计需要 1 分钟... -

[2022-04-06 14:38:42] Started by user coding

[2022-04-06 14:38:42] Running in Durability level: MAX_SURVIVABILITY

[2022-04-06 14:38:44] [Pipeline] Start of Pipeline

[2022-04-06 14:38:45] [Pipeline] node

[2022-04-06 14:38:45] Running on Jenkins in /root/workspace

[2022-04-06 14:38:45] [Pipeline] {

[2022-04-06 14:38:45] [Pipeline] stage

[2022-04-06 14:38:45] [Pipeline] { (检出 ZIP 包)

[2022-04-06 14:38:45] Stage "检出 ZIP 包" skipped due to when conditional

[2022-04-06 14:38:45] [Pipeline] }

[2022-04-06 14:38:45] [Pipeline] // stage

[2022-04-06 14:38:45] [Pipeline] stage

[2022-04-06 14:38:45] [Pipeline] { (检出代码仓库)

[2022-04-06 14:38:45] [Pipeline] sh

[2022-04-06 14:38:45] + git clone ****** .

[2022-04-06 14:38:45] Cloning into '.'...

[2022-04-06 14:38:49] [Pipeline] sh

[2022-04-06 14:38:49] + git checkout main

[2022-04-06 14:38:49] Already on 'main'

[2022-04-06 14:38:49] Your branch is up-to-date with 'origin/main'.

[2022-04-06 14:38:49] [Pipeline] }

[2022-04-06 14:38:49] [Pipeline] // stage

[2022-04-06 14:38:49] [Pipeline] stage

[2022-04-06 14:38:49] [Pipeline] { (构建 Docker 镜像)

[2022-04-06 14:38:49] [Pipeline] sh

[2022-04-06 14:38:49] + docker login -u ****** -p ****** ccr.ccs.tencentyun.com/tcb-******-xgkr/prod-2gackdamca3d0f56_covid-sh:covid-sh-001-20220406143838

[2022-04-06 14:38:49] WARNING! Using --password via the CLI is insecure. Use --password-stdin.

[2022-04-06 14:38:50] WARNING! Your password will be stored unencrypted in /root/.docker/config.json.

[2022-04-06 14:38:50] Configure a credential helper to remove this warning. See

[2022-04-06 14:38:50] https://docs.docker.com/engine/reference/commandline/login/#credentials-store

[2022-04-06 14:38:50]

[2022-04-06 14:38:50] Login Succeeded

[2022-04-06 14:38:50] [Pipeline] sh

[2022-04-06 14:38:50] + docker build -f Dockerfile -t ccr.ccs.tencentyun.com/tcb-******-xgkr/prod-2gackdamca3d0f56_covid-sh:covid-sh-001-20220406143838 .

[2022-04-06 14:38:50] Sending build context to Docker daemon 8.36MB

[2022-04-06 14:38:50] Step 1/20 : FROM rocker/r-ver:4.1.3

[2022-04-06 14:38:51] 4.1.3: Pulling from rocker/r-ver

[2022-04-06 14:38:51] 4d32b49e2995: Pulling fs layer

[2022-04-06 14:38:51] ece399f3b726: Pulling fs layer

[2022-04-06 14:38:51] a0919e05b9e7: Pulling fs layer

[2022-04-06 14:38:51] e2eaed373d67: Pulling fs layer

[2022-04-06 14:38:51] e844c157d640: Pulling fs layer

[2022-04-06 14:38:52] e2eaed373d67: Verifying Checksum

[2022-04-06 14:38:52] ece399f3b726: Verifying Checksum

[2022-04-06 14:38:52] ece399f3b726: Download complete

[2022-04-06 14:38:53] 4d32b49e2995: Download complete

[2022-04-06 14:38:53] e844c157d640: Verifying Checksum

[2022-04-06 14:38:53] e844c157d640: Download complete

[2022-04-06 14:38:54] 4d32b49e2995: Pull complete

[2022-04-06 14:38:54] ece399f3b726: Pull complete

[2022-04-06 14:39:12] a0919e05b9e7: Verifying Checksum

[2022-04-06 14:39:12] a0919e05b9e7: Download complete

[2022-04-06 14:39:14] a0919e05b9e7: Pull complete

[2022-04-06 14:39:14] e2eaed373d67: Pull complete

[2022-04-06 14:39:15] e844c157d640: Pull complete

[2022-04-06 14:39:15] Digest: sha256:d3debe574719a9eb91e898699566accf7d2c211b31ab4a2844f5de9d2acfb6dd

[2022-04-06 14:39:15] Status: Downloaded newer image for rocker/r-ver:4.1.3

[2022-04-06 14:39:15] ---> cdebda79a597

[2022-04-06 14:39:15] Step 2/20 : RUN apt-get update && apt-get install -y gdal-bin git-core libcurl4-openssl-dev libgdal-dev libgeos-dev libgeos++-dev libgit2-dev libicu-dev libpng-dev libproj-dev libssl-dev libxml2-dev make pandoc pandoc-citeproc zlib1g-dev && rm -rf /var/lib/apt/lists/*

[2022-04-06 14:39:15] ---> Running in a25a070999bd

[2022-04-06 14:39:16] Get:1 http://archive.ubuntu.com/ubuntu focal InRelease [265 kB]

[2022-04-06 14:39:16] Get:2 http://security.ubuntu.com/ubuntu focal-security InRelease [114 kB]

[2022-04-06 14:39:16] Get:3 http://security.ubuntu.com/ubuntu focal-security/restricted amd64 Packages [1,100 kB]

[2022-04-06 14:39:17] Get:4 http://archive.ubuntu.com/ubuntu focal-updates InRelease [114 kB]

[2022-04-06 14:39:17] Get:5 http://archive.ubuntu.com/ubuntu focal-backports InRelease [108 kB]

[2022-04-06 14:39:18] Get:6 http://archive.ubuntu.com/ubuntu focal/restricted amd64 Packages [33.4 kB]

[2022-04-06 14:39:18] Get:7 http://archive.ubuntu.com/ubuntu focal/multiverse amd64 Packages [177 kB]

[2022-04-06 14:39:18] Get:8 http://archive.ubuntu.com/ubuntu focal/main amd64 Packages [1,275 kB]

[2022-04-06 14:39:20] Get:9 http://security.ubuntu.com/ubuntu focal-security/main amd64 Packages [1,726 kB]

[2022-04-06 14:39:22] Get:10 http://archive.ubuntu.com/ubuntu focal/universe amd64 Packages [11.3 MB]

[2022-04-06 14:39:26] Get:11 http://security.ubuntu.com/ubuntu focal-security/universe amd64 Packages [864 kB]

[2022-04-06 14:39:29] Get:12 http://security.ubuntu.com/ubuntu focal-security/multiverse amd64 Packages [25.8 kB]

[2022-04-06 14:40:01] Get:13 http://archive.ubuntu.com/ubuntu focal-updates/universe amd64 Packages [1,150 kB]

[2022-04-06 14:40:01] Get:14 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 Packages [2,142 kB]

[2022-04-06 14:40:06] Get:15 http://archive.ubuntu.com/ubuntu focal-updates/multiverse amd64 Packages [30.3 kB]

[2022-04-06 14:40:06] Get:16 http://archive.ubuntu.com/ubuntu focal-updates/restricted amd64 Packages [1,174 kB]

[2022-04-06 14:40:09] Get:17 http://archive.ubuntu.com/ubuntu focal-backports/universe amd64 Packages [26.0 kB]

[2022-04-06 14:40:09] Get:18 http://archive.ubuntu.com/ubuntu focal-backports/main amd64 Packages [51.2 kB]

[2022-04-06 14:40:09] Fetched 21.7 MB in 54s (405 kB/s)

[2022-04-06 14:40:10] Reading package lists...

[2022-04-06 14:40:10] Building dependency tree...

[2022-04-06 14:40:10] Reading state information...

[2022-04-06 14:40:11] make is already the newest version (4.2.1-1.2).

[2022-04-06 14:40:11] The following additional packages will be installed:

[2022-04-06 14:40:11] autoconf automake autotools-dev default-libmysqlclient-dev gdal-data git-man

[2022-04-06 14:40:11] hdf5-helpers icu-devtools less libaec-dev libaec0 libarmadillo-dev

[2022-04-06 14:40:11] libarmadillo9 libarpack2 libarpack2-dev libbibutils6 libboost-dev

[2022-04-06 14:40:11] libboost1.71-dev libcbor0.6 libcfitsio-dev libcfitsio-doc libcfitsio8

[2022-04-06 14:40:11] libcharls-dev libcharls2 libcurl3-gnutls libdap-dev libdap25 libdapclient6v5

[2022-04-06 14:40:11] libdapserver7v5 libdpkg-perl libepsilon-dev libepsilon1 liberror-perl

[2022-04-06 14:40:11] libexpat1-dev libfido2-1 libfile-fcntllock-perl libfreexl-dev libfreexl1

[2022-04-06 14:40:11] libfyba-dev libfyba0 libgcrypt20-dev libgdal26 libgdbm-compat4 libgdbm6

[2022-04-06 14:40:11] libgeos-3.8.0 libgeos-c1v5 libgeotiff-dev libgeotiff5

[2022-04-06 14:40:11] libghc-pandoc-citeproc-data libgif-dev libgif7 libgit2-28 libgpg-error-dev

[2022-04-06 14:40:11] libhdf4-0-alt libhdf4-alt-dev libhdf5-103 libhdf5-cpp-103 libhdf5-dev

[2022-04-06 14:40:11] libhttp-parser-dev libhttp-parser2.9 libjbig-dev libjson-c-dev libjson-c4

[2022-04-06 14:40:11] libkml-dev libkmlbase1 libkmlconvenience1 libkmldom1 libkmlengine1

[2022-04-06 14:40:11] libkmlregionator1 libkmlxsd1 liblcms2-2 liblocale-gettext-perl libltdl-dev

[2022-04-06 14:40:11] libltdl7 liblzma-dev libmbedcrypto3 libmbedtls-dev libmbedtls12

[2022-04-06 14:40:11] libmbedx509-0 libminizip-dev libminizip1 libmysqlclient-dev libmysqlclient21

[2022-04-06 14:40:11] libnetcdf-dev libnetcdf15 libnspr4 libnss3 libodbc1 libogdi-dev libogdi4.1

[2022-04-06 14:40:11] libopenjp2-7 libopenjp2-7-dev libpcre16-3 libpcre3-dev libpcre32-3

[2022-04-06 14:40:11] libpcrecpp0v5 libperl5.30 libpng-tools libpoppler-dev libpoppler-private-dev

[2022-04-06 14:40:11] libpoppler97 libpq-dev libpq5 libproj15 libqhull-dev libqhull-r7 libqhull7

[2022-04-06 14:40:11] libsigsegv2 libspatialite-dev libspatialite7 libsqlite3-dev libssh2-1

[2022-04-06 14:40:11] libssh2-1-dev libsuperlu-dev libsuperlu5 libsz2 libtiff-dev libtool

[2022-04-06 14:40:11] liburiparser-dev liburiparser1 libwebp-dev libwebpdemux2 libwebpmux3

[2022-04-06 14:40:11] libxerces-c-dev libxerces-c3.2 libxml2 libxmuu1 libyaml-0-2 libzstd-dev m4

[2022-04-06 14:40:11] mysql-common netbase odbcinst odbcinst1debian2 openssh-client pandoc-data

[2022-04-06 14:40:11] patch perl perl-modules-5.30 pkg-config poppler-data proj-bin proj-data

[2022-04-06 14:40:11] python3-gdal python3-numpy python3-pkg-resources unixodbc-dev uuid-dev xauth

[2022-04-06 14:40:11] Suggested packages:

[2022-04-06 14:40:11] autoconf-archive gnu-standards autoconf-doc gettext libgdal-grass

[2022-04-06 14:40:11] gettext-base git-daemon-run | git-daemon-sysvinit git-doc git-el git-email

[2022-04-06 14:40:11] git-gui gitk gitweb git-cvs git-mediawiki git-svn libitpp-dev libboost-doc

[2022-04-06 14:40:11] libboost1.71-doc libboost-atomic1.71-dev libboost-chrono1.71-dev

[2022-04-06 14:40:11] libboost-container1.71-dev libboost-context1.71-dev

[2022-04-06 14:40:11] libboost-contract1.71-dev libboost-coroutine1.71-dev

[2022-04-06 14:40:11] libboost-date-time1.71-dev libboost-exception1.71-dev libboost-fiber1.71-dev

[2022-04-06 14:40:11] libboost-filesystem1.71-dev libboost-graph1.71-dev

[2022-04-06 14:40:11] libboost-graph-parallel1.71-dev libboost-iostreams1.71-dev

[2022-04-06 14:40:11] libboost-locale1.71-dev libboost-log1.71-dev libboost-math1.71-dev

[2022-04-06 14:40:11] libboost-mpi1.71-dev libboost-mpi-python1.71-dev libboost-numpy1.71-dev

[2022-04-06 14:40:11] libboost-program-options1.71-dev libboost-python1.71-dev

[2022-04-06 14:40:11] libboost-random1.71-dev libboost-regex1.71-dev

[2022-04-06 14:40:11] libboost-serialization1.71-dev libboost-stacktrace1.71-dev

[2022-04-06 14:40:11] libboost-system1.71-dev libboost-test1.71-dev libboost-thread1.71-dev

[2022-04-06 14:40:11] libboost-timer1.71-dev libboost-type-erasure1.71-dev libboost-wave1.71-dev

[2022-04-06 14:40:11] libboost1.71-tools-dev libmpfrc++-dev libntl-dev libcurl4-doc libidn11-dev

[2022-04-06 14:40:11] libkrb5-dev libldap2-dev librtmp-dev debian-keyring gnupg | gnupg2 bzr

[2022-04-06 14:40:11] libgcrypt20-doc libgdal-doc gdbm-l10n libgeotiff-epsg geotiff-bin

[2022-04-06 14:40:11] libhdf4-doc hdf4-tools libhdf5-doc icu-doc liblcms2-utils libtool-doc

[2022-04-06 14:40:11] libmbedtls-doc netcdf-bin netcdf-doc libmyodbc odbc-postgresql tdsodbc

[2022-04-06 14:40:11] unixodbc-bin ogdi-bin libfreetype6-dev postgresql-doc-12 sqlite3-doc

[2022-04-06 14:40:11] libssl-doc libsuperlu-doc gcj-jdk libxerces-c-doc m4-doc keychain libpam-ssh

[2022-04-06 14:40:11] monkeysphere ssh-askpass texlive-latex-recommended texlive-xetex

[2022-04-06 14:40:11] texlive-luatex texlive-latex-extra context wkhtmltopdf librsvg2-bin groff

[2022-04-06 14:40:11] ghc nodejs php python ruby r-base-core libjs-mathjax node-katex ed

[2022-04-06 14:40:11] diffutils-doc perl-doc libterm-readline-gnu-perl

[2022-04-06 14:40:11] | libterm-readline-perl-perl libb-debug-perl liblocale-codes-perl dpkg-dev

[2022-04-06 14:40:11] poppler-utils ghostscript fonts-japanese-mincho | fonts-ipafont-mincho

[2022-04-06 14:40:11] fonts-japanese-gothic | fonts-ipafont-gothic fonts-arphic-ukai

[2022-04-06 14:40:11] fonts-arphic-uming fonts-nanum python-numpy-doc python3-dev python3-pytest

[2022-04-06 14:40:11] python3-numpy-dbg python3-setuptools

[2022-04-06 14:40:11] The following NEW packages will be installed:

[2022-04-06 14:40:11] autoconf automake autotools-dev default-libmysqlclient-dev gdal-bin

[2022-04-06 14:40:11] gdal-data git git-man hdf5-helpers icu-devtools less libaec-dev libaec0

[2022-04-06 14:40:11] libarmadillo-dev libarmadillo9 libarpack2 libarpack2-dev libbibutils6

[2022-04-06 14:40:11] libboost-dev libboost1.71-dev libcbor0.6 libcfitsio-dev libcfitsio-doc

[2022-04-06 14:40:11] libcfitsio8 libcharls-dev libcharls2 libcurl3-gnutls libcurl4-openssl-dev

[2022-04-06 14:40:11] libdap-dev libdap25 libdapclient6v5 libdapserver7v5 libdpkg-perl

[2022-04-06 14:40:11] libepsilon-dev libepsilon1 liberror-perl libexpat1-dev libfido2-1

[2022-04-06 14:40:11] libfile-fcntllock-perl libfreexl-dev libfreexl1 libfyba-dev libfyba0

[2022-04-06 14:40:11] libgcrypt20-dev libgdal-dev libgdal26 libgdbm-compat4 libgdbm6 libgeos++-dev

[2022-04-06 14:40:11] libgeos-3.8.0 libgeos-c1v5 libgeos-dev libgeotiff-dev libgeotiff5

[2022-04-06 14:40:11] libghc-pandoc-citeproc-data libgif-dev libgif7 libgit2-28 libgit2-dev

[2022-04-06 14:40:11] libgpg-error-dev libhdf4-0-alt libhdf4-alt-dev libhdf5-103 libhdf5-cpp-103

[2022-04-06 14:40:11] libhdf5-dev libhttp-parser-dev libhttp-parser2.9 libicu-dev libjbig-dev

[2022-04-06 14:40:11] libjson-c-dev libjson-c4 libkml-dev libkmlbase1 libkmlconvenience1

[2022-04-06 14:40:11] libkmldom1 libkmlengine1 libkmlregionator1 libkmlxsd1 liblcms2-2

[2022-04-06 14:40:11] liblocale-gettext-perl libltdl-dev libltdl7 liblzma-dev libmbedcrypto3

[2022-04-06 14:40:11] libmbedtls-dev libmbedtls12 libmbedx509-0 libminizip-dev libminizip1

[2022-04-06 14:40:11] libmysqlclient-dev libmysqlclient21 libnetcdf-dev libnetcdf15 libnspr4

[2022-04-06 14:40:11] libnss3 libodbc1 libogdi-dev libogdi4.1 libopenjp2-7 libopenjp2-7-dev

[2022-04-06 14:40:11] libpcre16-3 libpcre3-dev libpcre32-3 libpcrecpp0v5 libperl5.30 libpng-dev

[2022-04-06 14:40:11] libpng-tools libpoppler-dev libpoppler-private-dev libpoppler97 libpq-dev

[2022-04-06 14:40:11] libpq5 libproj-dev libproj15 libqhull-dev libqhull-r7 libqhull7 libsigsegv2

[2022-04-06 14:40:11] libspatialite-dev libspatialite7 libsqlite3-dev libssh2-1 libssh2-1-dev

[2022-04-06 14:40:11] libssl-dev libsuperlu-dev libsuperlu5 libsz2 libtiff-dev libtool

[2022-04-06 14:40:11] liburiparser-dev liburiparser1 libwebp-dev libwebpdemux2 libwebpmux3

[2022-04-06 14:40:11] libxerces-c-dev libxerces-c3.2 libxml2 libxml2-dev libxmuu1 libyaml-0-2

[2022-04-06 14:40:11] libzstd-dev m4 mysql-common netbase odbcinst odbcinst1debian2 openssh-client

[2022-04-06 14:40:11] pandoc pandoc-citeproc pandoc-data patch perl perl-modules-5.30 pkg-config

[2022-04-06 14:40:11] poppler-data proj-bin proj-data python3-gdal python3-numpy

[2022-04-06 14:40:11] python3-pkg-resources unixodbc-dev uuid-dev xauth zlib1g-dev

[2022-04-06 14:40:12] 0 upgraded, 164 newly installed, 0 to remove and 6 not upgraded.

[2022-04-06 14:40:12] Need to get 128 MB of archives.

[2022-04-06 14:40:12] After this operation, 840 MB of additional disk space will be used.

[2022-04-06 14:40:12] Get:1 http://archive.ubuntu.com/ubuntu focal/main amd64 liblocale-gettext-perl amd64 1.07-4 [17.1 kB]

[2022-04-06 14:40:12] Get:2 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 perl-modules-5.30 all 5.30.0-9ubuntu0.2 [2,738 kB]

[2022-04-06 14:40:20] Get:3 http://archive.ubuntu.com/ubuntu focal/main amd64 libgdbm6 amd64 1.18.1-5 [27.4 kB]

[2022-04-06 14:40:20] Get:4 http://archive.ubuntu.com/ubuntu focal/main amd64 libgdbm-compat4 amd64 1.18.1-5 [6,244 B]

[2022-04-06 14:40:20] Get:5 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libperl5.30 amd64 5.30.0-9ubuntu0.2 [3,952 kB]

[2022-04-06 14:40:32] Get:6 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 perl amd64 5.30.0-9ubuntu0.2 [224 kB]

[2022-04-06 14:40:34] Get:7 http://archive.ubuntu.com/ubuntu focal/main amd64 poppler-data all 0.4.9-2 [1,475 kB]

[2022-04-06 14:40:39] Get:8 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 less amd64 551-1ubuntu0.1 [123 kB]

[2022-04-06 14:40:39] Get:9 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libjson-c4 amd64 0.13.1+dfsg-7ubuntu0.3 [29.3 kB]

[2022-04-06 14:40:39] Get:10 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libxml2 amd64 2.9.10+dfsg-5ubuntu0.20.04.2 [640 kB]

[2022-04-06 14:40:41] Get:11 http://archive.ubuntu.com/ubuntu focal/main amd64 libyaml-0-2 amd64 0.2.2-1 [48.9 kB]

[2022-04-06 14:40:41] Get:12 http://archive.ubuntu.com/ubuntu focal/main amd64 netbase all 6.1 [13.1 kB]

[2022-04-06 14:40:41] Get:13 http://archive.ubuntu.com/ubuntu focal/main amd64 python3-pkg-resources all 45.2.0-1 [130 kB]

[2022-04-06 14:40:42] Get:14 http://archive.ubuntu.com/ubuntu focal/main amd64 libcbor0.6 amd64 0.6.0-0ubuntu1 [21.1 kB]

[2022-04-06 14:40:42] Get:15 http://archive.ubuntu.com/ubuntu focal/main amd64 libfido2-1 amd64 1.3.1-1ubuntu2 [47.9 kB]

[2022-04-06 14:40:42] Get:16 http://archive.ubuntu.com/ubuntu focal/main amd64 libxmuu1 amd64 2:1.1.3-0ubuntu1 [9,728 B]

[2022-04-06 14:40:42] Get:17 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 openssh-client amd64 1:8.2p1-4ubuntu0.4 [671 kB]

[2022-04-06 14:40:45] Get:18 http://archive.ubuntu.com/ubuntu focal/main amd64 xauth amd64 1:1.1-0ubuntu1 [25.0 kB]

[2022-04-06 14:40:45] Get:19 http://archive.ubuntu.com/ubuntu focal/main amd64 libsigsegv2 amd64 2.12-2 [13.9 kB]

[2022-04-06 14:40:45] Get:20 http://archive.ubuntu.com/ubuntu focal/main amd64 m4 amd64 1.4.18-4 [199 kB]

[2022-04-06 14:40:46] Get:21 http://archive.ubuntu.com/ubuntu focal/main amd64 autoconf all 2.69-11.1 [321 kB]

[2022-04-06 14:40:47] Get:22 http://archive.ubuntu.com/ubuntu focal/main amd64 autotools-dev all 20180224.1 [39.6 kB]

[2022-04-06 14:40:47] Get:23 http://archive.ubuntu.com/ubuntu focal/main amd64 automake all 1:1.16.1-4ubuntu6 [522 kB]

[2022-04-06 14:40:49] Get:24 http://archive.ubuntu.com/ubuntu focal/main amd64 mysql-common all 5.8+1.0.5ubuntu2 [7,496 B]

[2022-04-06 14:40:49] Get:25 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libmysqlclient21 amd64 8.0.28-0ubuntu0.20.04.3 [1,292 kB]

[2022-04-06 14:40:53] Get:26 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libssl-dev amd64 1.1.1f-1ubuntu2.12 [1,584 kB]

[2022-04-06 14:40:58] Get:27 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 zlib1g-dev amd64 1:1.2.11.dfsg-2ubuntu1.3 [155 kB]

[2022-04-06 14:40:58] Get:28 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libmysqlclient-dev amd64 8.0.28-0ubuntu0.20.04.3 [1,600 kB]

[2022-04-06 14:41:04] Get:29 http://archive.ubuntu.com/ubuntu focal/main amd64 default-libmysqlclient-dev amd64 1.0.5ubuntu2 [3,932 B]

[2022-04-06 14:41:04] Get:30 http://archive.ubuntu.com/ubuntu focal/main amd64 python3-numpy amd64 1:1.17.4-5ubuntu3 [2,725 kB]

[2022-04-06 14:41:12] Get:31 http://archive.ubuntu.com/ubuntu focal/universe amd64 gdal-data all 3.0.4+dfsg-1build3 [186 kB]

[2022-04-06 14:41:12] Get:32 http://archive.ubuntu.com/ubuntu focal/universe amd64 libarpack2 amd64 3.7.0-3 [92.8 kB]

[2022-04-06 14:41:13] Get:33 http://archive.ubuntu.com/ubuntu focal/universe amd64 libsuperlu5 amd64 5.2.1+dfsg1-4 [159 kB]

[2022-04-06 14:41:13] Get:34 http://archive.ubuntu.com/ubuntu focal/universe amd64 libarmadillo9 amd64 1:9.800.4+dfsg-1build1 [93.2 kB]

[2022-04-06 14:41:14] Get:35 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libcurl3-gnutls amd64 7.68.0-1ubuntu2.7 [232 kB]

[2022-04-06 14:41:15] Get:36 http://archive.ubuntu.com/ubuntu focal/universe amd64 libcfitsio8 amd64 3.470-3 [466 kB]

[2022-04-06 14:41:16] Get:37 http://archive.ubuntu.com/ubuntu focal/universe amd64 libcharls2 amd64 2.0.0+dfsg-1build1 [74.1 kB]

[2022-04-06 14:41:17] Get:38 http://archive.ubuntu.com/ubuntu focal/universe amd64 libdap25 amd64 3.20.5-1 [435 kB]

[2022-04-06 14:41:18] Get:39 http://archive.ubuntu.com/ubuntu focal/universe amd64 libdapclient6v5 amd64 3.20.5-1 [92.2 kB]

[2022-04-06 14:41:19] Get:40 http://archive.ubuntu.com/ubuntu focal/universe amd64 libepsilon1 amd64 0.9.2+dfsg-4 [41.0 kB]

[2022-04-06 14:41:19] Get:41 http://archive.ubuntu.com/ubuntu focal/universe amd64 libfreexl1 amd64 1.0.5-3 [33.4 kB]

[2022-04-06 14:41:19] Get:42 http://archive.ubuntu.com/ubuntu focal/universe amd64 libfyba0 amd64 4.1.1-6build1 [113 kB]

[2022-04-06 14:41:20] Get:43 http://archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-3.8.0 amd64 3.8.0-1build1 [535 kB]

[2022-04-06 14:41:21] Get:44 http://archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-c1v5 amd64 3.8.0-1build1 [69.9 kB]

[2022-04-06 14:41:21] Get:45 http://archive.ubuntu.com/ubuntu focal/universe amd64 proj-data all 6.3.1-1 [7,647 kB]

[2022-04-06 14:41:48] Get:46 http://archive.ubuntu.com/ubuntu focal/universe amd64 libproj15 amd64 6.3.1-1 [925 kB]

[2022-04-06 14:41:48] Get:47 http://archive.ubuntu.com/ubuntu focal/universe amd64 libgeotiff5 amd64 1.5.1-2 [53.1 kB]

[2022-04-06 14:41:48] Get:48 http://archive.ubuntu.com/ubuntu focal/main amd64 libgif7 amd64 5.1.9-1 [32.2 kB]

[2022-04-06 14:41:48] Get:49 http://archive.ubuntu.com/ubuntu focal/universe amd64 libhdf4-0-alt amd64 4.2.14-1ubuntu1 [268 kB]

[2022-04-06 14:41:48] Get:50 http://archive.ubuntu.com/ubuntu focal/universe amd64 libaec0 amd64 1.0.4-1 [19.1 kB]

[2022-04-06 14:41:49] Get:51 http://archive.ubuntu.com/ubuntu focal/universe amd64 libsz2 amd64 1.0.4-1 [5,188 B]

[2022-04-06 14:41:49] Get:52 http://archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-103 amd64 1.10.4+repack-11ubuntu1 [1,311 kB]

[2022-04-06 14:41:54] Get:53 http://archive.ubuntu.com/ubuntu focal/universe amd64 libminizip1 amd64 1.1-8build1 [20.2 kB]

[2022-04-06 14:41:54] Get:54 http://archive.ubuntu.com/ubuntu focal/universe amd64 liburiparser1 amd64 0.9.3-2 [39.3 kB]

[2022-04-06 14:41:54] Get:55 http://archive.ubuntu.com/ubuntu focal/universe amd64 libkmlbase1 amd64 1.3.0-8build1 [45.4 kB]

[2022-04-06 14:41:54] Get:56 http://archive.ubuntu.com/ubuntu focal/universe amd64 libkmldom1 amd64 1.3.0-8build1 [152 kB]

[2022-04-06 14:41:55] Get:57 http://archive.ubuntu.com/ubuntu focal/universe amd64 libkmlengine1 amd64 1.3.0-8build1 [72.5 kB]

[2022-04-06 14:41:55] Get:58 http://archive.ubuntu.com/ubuntu focal/universe amd64 libnetcdf15 amd64 1:4.7.3-1 [341 kB]

[2022-04-06 14:41:56] Get:59 http://archive.ubuntu.com/ubuntu focal/main amd64 libltdl7 amd64 2.4.6-14 [38.5 kB]

[2022-04-06 14:41:57] Get:60 http://archive.ubuntu.com/ubuntu focal/main amd64 libodbc1 amd64 2.3.6-0.1build1 [189 kB]

[2022-04-06 14:41:57] Get:61 http://archive.ubuntu.com/ubuntu focal/universe amd64 libogdi4.1 amd64 4.1.0+ds-1build1 [198 kB]

[2022-04-06 14:41:58] Get:62 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libopenjp2-7 amd64 2.3.1-1ubuntu4.20.04.1 [141 kB]

[2022-04-06 14:41:59] Get:63 http://archive.ubuntu.com/ubuntu focal/main amd64 liblcms2-2 amd64 2.9-4 [140 kB]

[2022-04-06 14:41:59] Get:64 http://archive.ubuntu.com/ubuntu focal/main amd64 libnspr4 amd64 2:4.25-1 [107 kB]

[2022-04-06 14:42:00] Get:65 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libnss3 amd64 2:3.49.1-1ubuntu1.6 [1,256 kB]

[2022-04-06 14:42:04] Get:66 http://archive.ubuntu.com/ubuntu focal/main amd64 libpoppler97 amd64 0.86.1-0ubuntu1 [915 kB]

[2022-04-06 14:42:07] Get:67 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libpq5 amd64 12.9-0ubuntu0.20.04.1 [117 kB]

[2022-04-06 14:42:07] Get:68 http://archive.ubuntu.com/ubuntu focal/universe amd64 libqhull7 amd64 2015.2-4 [152 kB]

[2022-04-06 14:42:08] Get:69 http://archive.ubuntu.com/ubuntu focal/universe amd64 libspatialite7 amd64 4.3.0a-6build1 [1,286 kB]

[2022-04-06 14:42:12] Get:70 http://archive.ubuntu.com/ubuntu focal/universe amd64 libxerces-c3.2 amd64 3.2.2+debian-1build3 [878 kB]

[2022-04-06 14:42:15] Get:71 http://archive.ubuntu.com/ubuntu focal/main amd64 odbcinst amd64 2.3.6-0.1build1 [14.8 kB]

[2022-04-06 14:42:15] Get:72 http://archive.ubuntu.com/ubuntu focal/main amd64 odbcinst1debian2 amd64 2.3.6-0.1build1 [41.1 kB]

[2022-04-06 14:42:15] Get:73 http://archive.ubuntu.com/ubuntu focal/universe amd64 libgdal26 amd64 3.0.4+dfsg-1build3 [6,156 kB]

[2022-04-06 14:42:33] Get:74 http://archive.ubuntu.com/ubuntu focal/universe amd64 python3-gdal amd64 3.0.4+dfsg-1build3 [527 kB]

[2022-04-06 14:42:35] Get:75 http://archive.ubuntu.com/ubuntu focal/universe amd64 gdal-bin amd64 3.0.4+dfsg-1build3 [256 kB]

[2022-04-06 14:42:36] Get:76 http://archive.ubuntu.com/ubuntu focal/main amd64 liberror-perl all 0.17029-1 [26.5 kB]

[2022-04-06 14:42:36] Get:77 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 git-man all 1:2.25.1-1ubuntu3.2 [884 kB]

[2022-04-06 14:42:40] Get:78 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 git amd64 1:2.25.1-1ubuntu3.2 [4,554 kB]

[2022-04-06 14:42:54] Get:79 http://archive.ubuntu.com/ubuntu focal/universe amd64 hdf5-helpers amd64 1.10.4+repack-11ubuntu1 [13.6 kB]

[2022-04-06 14:42:54] Get:80 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 icu-devtools amd64 66.1-2ubuntu2.1 [189 kB]

[2022-04-06 14:42:54] Get:81 http://archive.ubuntu.com/ubuntu focal/universe amd64 libarpack2-dev amd64 3.7.0-3 [105 kB]

[2022-04-06 14:42:54] Get:82 http://archive.ubuntu.com/ubuntu focal/universe amd64 libaec-dev amd64 1.0.4-1 [16.9 kB]

[2022-04-06 14:42:54] Get:83 http://archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-cpp-103 amd64 1.10.4+repack-11ubuntu1 [120 kB]

[2022-04-06 14:42:55] Get:84 http://archive.ubuntu.com/ubuntu focal/universe amd64 libhdf5-dev amd64 1.10.4+repack-11ubuntu1 [2,589 kB]

[2022-04-06 14:43:03] Get:85 http://archive.ubuntu.com/ubuntu focal/universe amd64 libsuperlu-dev amd64 5.2.1+dfsg1-4 [16.4 kB]

[2022-04-06 14:43:03] Get:86 http://archive.ubuntu.com/ubuntu focal/universe amd64 libarmadillo-dev amd64 1:9.800.4+dfsg-1build1 [374 kB]

[2022-04-06 14:43:05] Get:87 http://archive.ubuntu.com/ubuntu focal/universe amd64 libbibutils6 amd64 6.2-1 [365 kB]

[2022-04-06 14:43:06] Get:88 http://archive.ubuntu.com/ubuntu focal/main amd64 libboost1.71-dev amd64 1.71.0-6ubuntu6 [9,068 kB]

[2022-04-06 14:43:38] Get:89 http://archive.ubuntu.com/ubuntu focal/main amd64 libboost-dev amd64 1.71.0.0ubuntu2 [3,596 B]

[2022-04-06 14:43:38] Get:90 http://archive.ubuntu.com/ubuntu focal/universe amd64 libcfitsio-dev amd64 3.470-3 [517 kB]

[2022-04-06 14:43:38] Get:91 http://archive.ubuntu.com/ubuntu focal/universe amd64 libcfitsio-doc all 3.470-3 [2,015 kB]

[2022-04-06 14:43:41] Get:92 http://archive.ubuntu.com/ubuntu focal/universe amd64 libcharls-dev amd64 2.0.0+dfsg-1build1 [6,568 B]

[2022-04-06 14:43:41] Get:93 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libcurl4-openssl-dev amd64 7.68.0-1ubuntu2.7 [321 kB]

[2022-04-06 14:43:42] Get:94 http://archive.ubuntu.com/ubuntu focal/universe amd64 libdapserver7v5 amd64 3.20.5-1 [23.0 kB]

[2022-04-06 14:43:42] Get:95 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libicu-dev amd64 66.1-2ubuntu2.1 [9,451 kB]

[2022-04-06 14:44:14] Get:96 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libxml2-dev amd64 2.9.10+dfsg-5ubuntu0.20.04.2 [737 kB]

[2022-04-06 14:44:14] Get:97 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 uuid-dev amd64 2.34-0.1ubuntu9.3 [33.6 kB]

[2022-04-06 14:44:14] Get:98 http://archive.ubuntu.com/ubuntu focal/main amd64 libdpkg-perl all 1.19.7ubuntu3 [230 kB]

[2022-04-06 14:44:14] Get:99 http://archive.ubuntu.com/ubuntu focal/main amd64 pkg-config amd64 0.29.1-0ubuntu4 [45.5 kB]

[2022-04-06 14:44:14] Get:100 http://archive.ubuntu.com/ubuntu focal/universe amd64 libdap-dev amd64 3.20.5-1 [745 kB]

[2022-04-06 14:44:17] Get:101 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libexpat1-dev amd64 2.2.9-1ubuntu0.4 [117 kB]

[2022-04-06 14:44:17] Get:102 http://archive.ubuntu.com/ubuntu focal/main amd64 libfile-fcntllock-perl amd64 0.22-3build4 [33.1 kB]

[2022-04-06 14:44:17] Get:103 http://archive.ubuntu.com/ubuntu focal/universe amd64 libfyba-dev amd64 4.1.1-6build1 [167 kB]

[2022-04-06 14:44:18] Get:104 http://archive.ubuntu.com/ubuntu focal/main amd64 libgpg-error-dev amd64 1.37-1 [109 kB]

[2022-04-06 14:44:18] Get:105 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libgcrypt20-dev amd64 1.8.5-5ubuntu1.1 [471 kB]

[2022-04-06 14:44:20] Get:106 http://archive.ubuntu.com/ubuntu focal/universe amd64 libgeos-dev amd64 3.8.0-1build1 [92.3 kB]

[2022-04-06 14:44:20] Get:107 http://archive.ubuntu.com/ubuntu focal/universe amd64 libgeos++-dev amd64 3.8.0-1build1 [1,067 kB]

[2022-04-06 14:44:25] Get:108 http://archive.ubuntu.com/ubuntu focal/main amd64 libgif-dev amd64 5.1.9-1 [20.6 kB]

[2022-04-06 14:44:25] Get:109 http://archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser2.9 amd64 2.9.2-2 [21.8 kB]

[2022-04-06 14:44:25] Get:110 http://archive.ubuntu.com/ubuntu focal/universe amd64 libmbedcrypto3 amd64 2.16.4-1ubuntu2 [150 kB]

[2022-04-06 14:44:25] Get:111 http://archive.ubuntu.com/ubuntu focal/universe amd64 libmbedx509-0 amd64 2.16.4-1ubuntu2 [42.3 kB]

[2022-04-06 14:44:25] Get:112 http://archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls12 amd64 2.16.4-1ubuntu2 [71.8 kB]

[2022-04-06 14:44:26] Get:113 http://archive.ubuntu.com/ubuntu focal/universe amd64 libssh2-1 amd64 1.8.0-2.1build1 [75.4 kB]

[2022-04-06 14:44:26] Get:114 http://archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-28 amd64 0.28.4+dfsg.1-2 [403 kB]

[2022-04-06 14:44:27] Get:115 http://archive.ubuntu.com/ubuntu focal/universe amd64 libkmlconvenience1 amd64 1.3.0-8build1 [44.7 kB]

[2022-04-06 14:44:28] Get:116 http://archive.ubuntu.com/ubuntu focal/universe amd64 libkmlregionator1 amd64 1.3.0-8build1 [19.8 kB]

[2022-04-06 14:44:28] Get:117 http://archive.ubuntu.com/ubuntu focal/universe amd64 libkmlxsd1 amd64 1.3.0-8build1 [27.1 kB]

[2022-04-06 14:44:28] Get:118 http://archive.ubuntu.com/ubuntu focal/main amd64 libltdl-dev amd64 2.4.6-14 [162 kB]

[2022-04-06 14:44:29] Get:119 http://archive.ubuntu.com/ubuntu focal/universe amd64 libmbedtls-dev amd64 2.16.4-1ubuntu2 [444 kB]

[2022-04-06 14:44:30] Get:120 http://archive.ubuntu.com/ubuntu focal/universe amd64 libminizip-dev amd64 1.1-8build1 [26.7 kB]

[2022-04-06 14:44:31] Get:121 http://archive.ubuntu.com/ubuntu focal/universe amd64 libnetcdf-dev amd64 1:4.7.3-1 [45.7 kB]

[2022-04-06 14:44:31] Get:122 http://archive.ubuntu.com/ubuntu focal/universe amd64 libogdi-dev amd64 4.1.0+ds-1build1 [22.1 kB]

[2022-04-06 14:44:31] Get:123 http://archive.ubuntu.com/ubuntu focal/main amd64 libpcre16-3 amd64 2:8.39-12build1 [150 kB]

[2022-04-06 14:44:32] Get:124 http://archive.ubuntu.com/ubuntu focal/main amd64 libpcre32-3 amd64 2:8.39-12build1 [140 kB]

[2022-04-06 14:44:33] Get:125 http://archive.ubuntu.com/ubuntu focal/main amd64 libpcrecpp0v5 amd64 2:8.39-12build1 [15.5 kB]

[2022-04-06 14:44:33] Get:126 http://archive.ubuntu.com/ubuntu focal/main amd64 libpcre3-dev amd64 2:8.39-12build1 [540 kB]

[2022-04-06 14:44:35] Get:127 http://archive.ubuntu.com/ubuntu focal/main amd64 libpng-dev amd64 1.6.37-2 [175 kB]

[2022-04-06 14:44:35] Get:128 http://archive.ubuntu.com/ubuntu focal/main amd64 libpng-tools amd64 1.6.37-2 [26.1 kB]

[2022-04-06 14:44:36] Get:129 http://archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-dev amd64 0.86.1-0ubuntu1 [5,336 B]

[2022-04-06 14:44:36] Get:130 http://archive.ubuntu.com/ubuntu focal/main amd64 libpoppler-private-dev amd64 0.86.1-0ubuntu1 [174 kB]

[2022-04-06 14:44:36] Get:131 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libpq-dev amd64 12.9-0ubuntu0.20.04.1 [136 kB]

[2022-04-06 14:44:37] Get:132 http://archive.ubuntu.com/ubuntu focal/universe amd64 libqhull-r7 amd64 2015.2-4 [149 kB]

[2022-04-06 14:44:38] Get:133 http://archive.ubuntu.com/ubuntu focal/universe amd64 libqhull-dev amd64 2015.2-4 [357 kB]

[2022-04-06 14:44:39] Get:134 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libsqlite3-dev amd64 3.31.1-4ubuntu0.2 [696 kB]

[2022-04-06 14:44:41] Get:135 http://archive.ubuntu.com/ubuntu focal/universe amd64 libssh2-1-dev amd64 1.8.0-2.1build1 [244 kB]

[2022-04-06 14:44:42] Get:136 http://archive.ubuntu.com/ubuntu focal/main amd64 libjbig-dev amd64 2.1-3.1build1 [25.2 kB]

[2022-04-06 14:44:42] Get:137 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 liblzma-dev amd64 5.2.4-1ubuntu1 [147 kB]

[2022-04-06 14:44:43] Get:138 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libtiff-dev amd64 4.1.0+git191117-2ubuntu0.20.04.2 [285 kB]

[2022-04-06 14:44:44] Get:139 http://archive.ubuntu.com/ubuntu focal/main amd64 libtool all 2.4.6-14 [161 kB]

[2022-04-06 14:44:45] Get:140 http://archive.ubuntu.com/ubuntu focal/universe amd64 liburiparser-dev amd64 0.9.3-2 [12.0 kB]

[2022-04-06 14:44:45] Get:141 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libwebpdemux2 amd64 0.6.1-2ubuntu0.20.04.1 [9,576 B]

[2022-04-06 14:44:45] Get:142 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libwebpmux3 amd64 0.6.1-2ubuntu0.20.04.1 [19.5 kB]

[2022-04-06 14:44:45] Get:143 http://archive.ubuntu.com/ubuntu focal/universe amd64 libxerces-c-dev amd64 3.2.2+debian-1build3 [1,694 kB]

[2022-04-06 14:44:52] Get:144 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libzstd-dev amd64 1.4.4+dfsg-3ubuntu0.1 [286 kB]

[2022-04-06 14:44:52] Get:145 http://archive.ubuntu.com/ubuntu focal/universe amd64 pandoc-data all 2.5-3build2 [76.0 kB]

[2022-04-06 14:44:52] Get:146 http://archive.ubuntu.com/ubuntu focal/universe amd64 pandoc amd64 2.5-3build2 [15.4 MB]

[2022-04-06 14:45:38] Get:147 http://archive.ubuntu.com/ubuntu focal/main amd64 patch amd64 2.7.6-6 [105 kB]

[2022-04-06 14:45:38] Get:148 http://archive.ubuntu.com/ubuntu focal/universe amd64 libepsilon-dev amd64 0.9.2+dfsg-4 [48.6 kB]

[2022-04-06 14:45:38] Get:149 http://archive.ubuntu.com/ubuntu focal/universe amd64 libfreexl-dev amd64 1.0.5-3 [30.9 kB]

[2022-04-06 14:45:38] Get:150 http://archive.ubuntu.com/ubuntu focal/universe amd64 libproj-dev amd64 6.3.1-1 [1,092 kB]

[2022-04-06 14:45:42] Get:151 http://archive.ubuntu.com/ubuntu focal/universe amd64 libgeotiff-dev amd64 1.5.1-2 [76.8 kB]

[2022-04-06 14:45:42] Get:152 http://archive.ubuntu.com/ubuntu focal/universe amd64 libhdf4-alt-dev amd64 4.2.14-1ubuntu1 [369 kB]

[2022-04-06 14:45:43] Get:153 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libjson-c-dev amd64 0.13.1+dfsg-7ubuntu0.3 [46.9 kB]

[2022-04-06 14:45:43] Get:154 http://archive.ubuntu.com/ubuntu focal/universe amd64 libkml-dev amd64 1.3.0-8build1 [933 kB]

[2022-04-06 14:45:46] Get:155 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libopenjp2-7-dev amd64 2.3.1-1ubuntu4.20.04.1 [26.7 kB]

[2022-04-06 14:45:46] Get:156 http://archive.ubuntu.com/ubuntu focal/universe amd64 libspatialite-dev amd64 4.3.0a-6build1 [1,387 kB]

[2022-04-06 14:45:51] Get:157 http://archive.ubuntu.com/ubuntu focal-updates/main amd64 libwebp-dev amd64 0.6.1-2ubuntu0.20.04.1 [266 kB]

[2022-04-06 14:45:52] Get:158 http://archive.ubuntu.com/ubuntu focal/main amd64 unixodbc-dev amd64 2.3.6-0.1build1 [225 kB]

[2022-04-06 14:45:53] Get:159 http://archive.ubuntu.com/ubuntu focal/universe amd64 libgdal-dev amd64 3.0.4+dfsg-1build3 [8,093 kB]

[2022-04-06 14:46:19] Get:160 http://archive.ubuntu.com/ubuntu focal/universe amd64 libghc-pandoc-citeproc-data all 0.15.0.1-1build4 [51.1 kB]

[2022-04-06 14:46:19] Get:161 http://archive.ubuntu.com/ubuntu focal/universe amd64 libhttp-parser-dev amd64 2.9.2-2 [20.2 kB]

[2022-04-06 14:46:19] Get:162 http://archive.ubuntu.com/ubuntu focal/universe amd64 libgit2-dev amd64 0.28.4+dfsg.1-2 [691 kB]

[2022-04-06 14:46:19] Get:163 http://archive.ubuntu.com/ubuntu focal/universe amd64 pandoc-citeproc amd64 0.15.0.1-1build4 [12.9 MB]

[2022-04-06 14:46:58] Get:164 http://archive.ubuntu.com/ubuntu focal/universe amd64 proj-bin amd64 6.3.1-1 [88.8 kB]

[2022-04-06 14:46:58] debconf: delaying package configuration, since apt-utils is not installed

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[2022-04-06 14:46:58] Preparing to unpack .../000-liblocale-gettext-perl_1.07-4_amd64.deb ...

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[2022-04-06 14:46:58] Selecting previously unselected package perl-modules-5.30.

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[2022-04-06 14:46:59] Selecting previously unselected package mysql-common.

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[2022-04-06 14:47:00] Selecting previously unselected package python3-numpy.

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[2022-04-06 14:47:00] Selecting previously unselected package gdal-data.

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[2022-04-06 14:47:00] Selecting previously unselected package libdapclient6v5:amd64.

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[2022-04-06 14:47:01] Selecting previously unselected package libepsilon1:amd64.

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[2022-04-06 14:47:01] Selecting previously unselected package libfreexl1:amd64.

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[2022-04-06 14:47:01] Selecting previously unselected package libgeos-3.8.0:amd64.

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[2022-04-06 14:47:01] Selecting previously unselected package libgeos-c1v5:amd64.

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[2022-04-06 14:47:01] Selecting previously unselected package proj-data.

[2022-04-06 14:47:01] Preparing to unpack .../044-proj-data_6.3.1-1_all.deb ...

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[2022-04-06 14:47:02] Selecting previously unselected package libgif7:amd64.

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[2022-04-06 14:47:02] Selecting previously unselected package libhdf4-0-alt.

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[2022-04-06 14:47:02] Selecting previously unselected package libaec0:amd64.

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[2022-04-06 14:47:02] Selecting previously unselected package libminizip1:amd64.

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[2022-04-06 14:47:02] Selecting previously unselected package liburiparser1:amd64.

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[2022-04-06 14:47:02] Selecting previously unselected package libkmlbase1:amd64.

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[2022-04-06 14:47:02] Selecting previously unselected package libnetcdf15:amd64.

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[2022-04-06 14:47:03] Unpacking libogdi4.1 (4.1.0+ds-1build1) ...

[2022-04-06 14:47:03] Selecting previously unselected package libopenjp2-7:amd64.

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[2022-04-06 14:47:03] Unpacking libopenjp2-7:amd64 (2.3.1-1ubuntu4.20.04.1) ...

[2022-04-06 14:47:03] Selecting previously unselected package liblcms2-2:amd64.

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[2022-04-06 14:47:03] Selecting previously unselected package libnspr4:amd64.

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[2022-04-06 14:47:03] Selecting previously unselected package libnss3:amd64.

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[2022-04-06 14:47:03] Selecting previously unselected package libpoppler97:amd64.

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[2022-04-06 14:47:03] Selecting previously unselected package libpq5:amd64.

[2022-04-06 14:47:03] Preparing to unpack .../066-libpq5_12.9-0ubuntu0.20.04.1_amd64.deb ...

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[2022-04-06 14:47:03] Selecting previously unselected package libqhull7:amd64.

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[2022-04-06 14:47:03] Selecting previously unselected package libspatialite7:amd64.

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[2022-04-06 14:47:03] Selecting previously unselected package libxerces-c3.2:amd64.

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[2022-04-06 14:47:03] Selecting previously unselected package odbcinst.

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[2022-04-06 14:47:03] Selecting previously unselected package odbcinst1debian2:amd64.

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[2022-04-06 14:47:03] Selecting previously unselected package libgdal26.

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[2022-04-06 14:47:04] Selecting previously unselected package python3-gdal.

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[2022-04-06 14:47:04] Selecting previously unselected package gdal-bin.

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[2022-04-06 14:47:04] Selecting previously unselected package liberror-perl.

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[2022-04-06 14:47:04] Selecting previously unselected package git-man.

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[2022-04-06 14:47:04] Selecting previously unselected package git.

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[2022-04-06 14:47:05] Selecting previously unselected package hdf5-helpers.

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[2022-04-06 14:47:05] Selecting previously unselected package icu-devtools.

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[2022-04-06 14:47:05] Selecting previously unselected package libarpack2-dev:amd64.

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[2022-04-06 14:47:05] Selecting previously unselected package libaec-dev:amd64.

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[2022-04-06 14:47:05] Selecting previously unselected package libsuperlu-dev:amd64.

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[2022-04-06 14:47:05] Selecting previously unselected package libarmadillo-dev.

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[2022-04-06 14:47:05] Selecting previously unselected package libbibutils6.

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[2022-04-06 14:47:05] Selecting previously unselected package libboost1.71-dev:amd64.

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[2022-04-06 14:47:07] Selecting previously unselected package libcfitsio-dev:amd64.

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[2022-04-06 14:47:07] Selecting previously unselected package libcfitsio-doc.

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[2022-04-06 14:47:07] Selecting previously unselected package libcharls-dev:amd64.

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[2022-04-06 14:47:07] Selecting previously unselected package libcurl4-openssl-dev:amd64.

[2022-04-06 14:47:07] Preparing to unpack .../092-libcurl4-openssl-dev_7.68.0-1ubuntu2.7_amd64.deb ...

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[2022-04-06 14:47:07] Selecting previously unselected package libdapserver7v5:amd64.

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[2022-04-06 14:47:07] Unpacking libdapserver7v5:amd64 (3.20.5-1) ...

[2022-04-06 14:47:07] Selecting previously unselected package libicu-dev:amd64.

[2022-04-06 14:47:07] Preparing to unpack .../094-libicu-dev_66.1-2ubuntu2.1_amd64.deb ...

[2022-04-06 14:47:07] Unpacking libicu-dev:amd64 (66.1-2ubuntu2.1) ...

[2022-04-06 14:47:08] Selecting previously unselected package libxml2-dev:amd64.

[2022-04-06 14:47:08] Preparing to unpack .../095-libxml2-dev_2.9.10+dfsg-5ubuntu0.20.04.2_amd64.deb ...

[2022-04-06 14:47:08] Unpacking libxml2-dev:amd64 (2.9.10+dfsg-5ubuntu0.20.04.2) ...

[2022-04-06 14:47:08] Selecting previously unselected package uuid-dev:amd64.

[2022-04-06 14:47:08] Preparing to unpack .../096-uuid-dev_2.34-0.1ubuntu9.3_amd64.deb ...

[2022-04-06 14:47:08] Unpacking uuid-dev:amd64 (2.34-0.1ubuntu9.3) ...

[2022-04-06 14:47:08] Selecting previously unselected package libdpkg-perl.

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[2022-04-06 14:47:08] Selecting previously unselected package pkg-config.

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[2022-04-06 14:47:08] Selecting previously unselected package libdap-dev:amd64.

[2022-04-06 14:47:08] Preparing to unpack .../099-libdap-dev_3.20.5-1_amd64.deb ...

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[2022-04-06 14:47:08] Selecting previously unselected package libexpat1-dev:amd64.

[2022-04-06 14:47:08] Preparing to unpack .../100-libexpat1-dev_2.2.9-1ubuntu0.4_amd64.deb ...

[2022-04-06 14:47:08] Unpacking libexpat1-dev:amd64 (2.2.9-1ubuntu0.4) ...

[2022-04-06 14:47:08] Selecting previously unselected package libfile-fcntllock-perl.

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[2022-04-06 14:47:08] Selecting previously unselected package libfyba-dev:amd64.

[2022-04-06 14:47:08] Preparing to unpack .../102-libfyba-dev_4.1.1-6build1_amd64.deb ...

[2022-04-06 14:47:08] Unpacking libfyba-dev:amd64 (4.1.1-6build1) ...

[2022-04-06 14:47:08] Selecting previously unselected package libgpg-error-dev.

[2022-04-06 14:47:08] Preparing to unpack .../103-libgpg-error-dev_1.37-1_amd64.deb ...

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[2022-04-06 14:47:08] Selecting previously unselected package libgcrypt20-dev.

[2022-04-06 14:47:08] Preparing to unpack .../104-libgcrypt20-dev_1.8.5-5ubuntu1.1_amd64.deb ...

[2022-04-06 14:47:08] Unpacking libgcrypt20-dev (1.8.5-5ubuntu1.1) ...

[2022-04-06 14:47:09] Selecting previously unselected package libgeos-dev.

[2022-04-06 14:47:09] Preparing to unpack .../105-libgeos-dev_3.8.0-1build1_amd64.deb ...

[2022-04-06 14:47:09] Unpacking libgeos-dev (3.8.0-1build1) ...

[2022-04-06 14:47:09] Selecting previously unselected package libgeos++-dev.

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[2022-04-06 14:47:09] Selecting previously unselected package libgif-dev.

[2022-04-06 14:47:09] Preparing to unpack .../107-libgif-dev_5.1.9-1_amd64.deb ...

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[2022-04-06 14:47:09] Selecting previously unselected package libhttp-parser2.9:amd64.

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[2022-04-06 14:47:09] Unpacking libhttp-parser2.9:amd64 (2.9.2-2) ...

[2022-04-06 14:47:09] Selecting previously unselected package libmbedcrypto3:amd64.

[2022-04-06 14:47:09] Preparing to unpack .../109-libmbedcrypto3_2.16.4-1ubuntu2_amd64.deb ...

[2022-04-06 14:47:09] Unpacking libmbedcrypto3:amd64 (2.16.4-1ubuntu2) ...

[2022-04-06 14:47:09] Selecting previously unselected package libmbedx509-0:amd64.

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[2022-04-06 14:47:09] Unpacking libmbedx509-0:amd64 (2.16.4-1ubuntu2) ...

[2022-04-06 14:47:09] Selecting previously unselected package libmbedtls12:amd64.

[2022-04-06 14:47:09] Preparing to unpack .../111-libmbedtls12_2.16.4-1ubuntu2_amd64.deb ...

[2022-04-06 14:47:09] Unpacking libmbedtls12:amd64 (2.16.4-1ubuntu2) ...

[2022-04-06 14:47:09] Selecting previously unselected package libssh2-1:amd64.

[2022-04-06 14:47:09] Preparing to unpack .../112-libssh2-1_1.8.0-2.1build1_amd64.deb ...

[2022-04-06 14:47:09] Unpacking libssh2-1:amd64 (1.8.0-2.1build1) ...

[2022-04-06 14:47:09] Selecting previously unselected package libgit2-28:amd64.

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[2022-04-06 14:47:09] Selecting previously unselected package libkmlconvenience1:amd64.

[2022-04-06 14:47:09] Preparing to unpack .../114-libkmlconvenience1_1.3.0-8build1_amd64.deb ...

[2022-04-06 14:47:09] Unpacking libkmlconvenience1:amd64 (1.3.0-8build1) ...

[2022-04-06 14:47:09] Selecting previously unselected package libkmlregionator1:amd64.

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[2022-04-06 14:47:09] Unpacking libkmlregionator1:amd64 (1.3.0-8build1) ...

[2022-04-06 14:47:09] Selecting previously unselected package libkmlxsd1:amd64.

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[2022-04-06 14:47:09] Unpacking libkmlxsd1:amd64 (1.3.0-8build1) ...

[2022-04-06 14:47:09] Selecting previously unselected package libltdl-dev:amd64.

[2022-04-06 14:47:09] Preparing to unpack .../117-libltdl-dev_2.4.6-14_amd64.deb ...

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[2022-04-06 14:47:09] Selecting previously unselected package libmbedtls-dev:amd64.

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[2022-04-06 14:47:09] Unpacking libmbedtls-dev:amd64 (2.16.4-1ubuntu2) ...

[2022-04-06 14:47:09] Selecting previously unselected package libminizip-dev:amd64.

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[2022-04-06 14:47:09] Unpacking libminizip-dev:amd64 (1.1-8build1) ...

[2022-04-06 14:47:09] Selecting previously unselected package libnetcdf-dev.

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[2022-04-06 14:47:09] Unpacking libnetcdf-dev (1:4.7.3-1) ...

[2022-04-06 14:47:09] Selecting previously unselected package libogdi-dev.

[2022-04-06 14:47:09] Preparing to unpack .../121-libogdi-dev_4.1.0+ds-1build1_amd64.deb ...

[2022-04-06 14:47:09] Unpacking libogdi-dev (4.1.0+ds-1build1) ...

[2022-04-06 14:47:09] Selecting previously unselected package libpcre16-3:amd64.

[2022-04-06 14:47:09] Preparing to unpack .../122-libpcre16-3_2%3a8.39-12build1_amd64.deb ...

[2022-04-06 14:47:09] Unpacking libpcre16-3:amd64 (2:8.39-12build1) ...

[2022-04-06 14:47:09] Selecting previously unselected package libpcre32-3:amd64.

[2022-04-06 14:47:09] Preparing to unpack .../123-libpcre32-3_2%3a8.39-12build1_amd64.deb ...

[2022-04-06 14:47:09] Unpacking libpcre32-3:amd64 (2:8.39-12build1) ...

[2022-04-06 14:47:09] Selecting previously unselected package libpcrecpp0v5:amd64.

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[2022-04-06 14:47:09] Unpacking libpcrecpp0v5:amd64 (2:8.39-12build1) ...

[2022-04-06 14:47:10] Selecting previously unselected package libpcre3-dev:amd64.

[2022-04-06 14:47:10] Preparing to unpack .../125-libpcre3-dev_2%3a8.39-12build1_amd64.deb ...

[2022-04-06 14:47:10] Unpacking libpcre3-dev:amd64 (2:8.39-12build1) ...

[2022-04-06 14:47:10] Selecting previously unselected package libpng-dev:amd64.

[2022-04-06 14:47:10] Preparing to unpack .../126-libpng-dev_1.6.37-2_amd64.deb ...

[2022-04-06 14:47:10] Unpacking libpng-dev:amd64 (1.6.37-2) ...

[2022-04-06 14:47:10] Selecting previously unselected package libpng-tools.

[2022-04-06 14:47:10] Preparing to unpack .../127-libpng-tools_1.6.37-2_amd64.deb ...

[2022-04-06 14:47:10] Unpacking libpng-tools (1.6.37-2) ...

[2022-04-06 14:47:10] Selecting previously unselected package libpoppler-dev:amd64.

[2022-04-06 14:47:10] Preparing to unpack .../128-libpoppler-dev_0.86.1-0ubuntu1_amd64.deb ...

[2022-04-06 14:47:10] Unpacking libpoppler-dev:amd64 (0.86.1-0ubuntu1) ...

[2022-04-06 14:47:10] Selecting previously unselected package libpoppler-private-dev:amd64.

[2022-04-06 14:47:10] Preparing to unpack .../129-libpoppler-private-dev_0.86.1-0ubuntu1_amd64.deb ...

[2022-04-06 14:47:10] Unpacking libpoppler-private-dev:amd64 (0.86.1-0ubuntu1) ...

[2022-04-06 14:47:10] Selecting previously unselected package libpq-dev.

[2022-04-06 14:47:10] Preparing to unpack .../130-libpq-dev_12.9-0ubuntu0.20.04.1_amd64.deb ...

[2022-04-06 14:47:10] Unpacking libpq-dev (12.9-0ubuntu0.20.04.1) ...

[2022-04-06 14:47:10] Selecting previously unselected package libqhull-r7:amd64.

[2022-04-06 14:47:10] Preparing to unpack .../131-libqhull-r7_2015.2-4_amd64.deb ...

[2022-04-06 14:47:10] Unpacking libqhull-r7:amd64 (2015.2-4) ...

[2022-04-06 14:47:10] Selecting previously unselected package libqhull-dev:amd64.

[2022-04-06 14:47:10] Preparing to unpack .../132-libqhull-dev_2015.2-4_amd64.deb ...

[2022-04-06 14:47:10] Unpacking libqhull-dev:amd64 (2015.2-4) ...

[2022-04-06 14:47:10] Selecting previously unselected package libsqlite3-dev:amd64.

[2022-04-06 14:47:10] Preparing to unpack .../133-libsqlite3-dev_3.31.1-4ubuntu0.2_amd64.deb ...

[2022-04-06 14:47:10] Unpacking libsqlite3-dev:amd64 (3.31.1-4ubuntu0.2) ...

[2022-04-06 14:47:10] Selecting previously unselected package libssh2-1-dev:amd64.

[2022-04-06 14:47:10] Preparing to unpack .../134-libssh2-1-dev_1.8.0-2.1build1_amd64.deb ...

[2022-04-06 14:47:10] Unpacking libssh2-1-dev:amd64 (1.8.0-2.1build1) ...

[2022-04-06 14:47:10] Selecting previously unselected package libjbig-dev:amd64.

[2022-04-06 14:47:10] Preparing to unpack .../135-libjbig-dev_2.1-3.1build1_amd64.deb ...

[2022-04-06 14:47:10] Unpacking libjbig-dev:amd64 (2.1-3.1build1) ...

[2022-04-06 14:47:10] Selecting previously unselected package liblzma-dev:amd64.

[2022-04-06 14:47:10] Preparing to unpack .../136-liblzma-dev_5.2.4-1ubuntu1_amd64.deb ...

[2022-04-06 14:47:10] Unpacking liblzma-dev:amd64 (5.2.4-1ubuntu1) ...

[2022-04-06 14:47:10] Selecting previously unselected package libtiff-dev:amd64.

[2022-04-06 14:47:10] Preparing to unpack .../137-libtiff-dev_4.1.0+git191117-2ubuntu0.20.04.2_amd64.deb ...

[2022-04-06 14:47:10] Unpacking libtiff-dev:amd64 (4.1.0+git191117-2ubuntu0.20.04.2) ...

[2022-04-06 14:47:10] Selecting previously unselected package libtool.

[2022-04-06 14:47:10] Preparing to unpack .../138-libtool_2.4.6-14_all.deb ...

[2022-04-06 14:47:10] Unpacking libtool (2.4.6-14) ...

[2022-04-06 14:47:10] Selecting previously unselected package liburiparser-dev.

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[2022-04-06 14:47:10] Unpacking liburiparser-dev (0.9.3-2) ...

[2022-04-06 14:47:10] Selecting previously unselected package libwebpdemux2:amd64.

[2022-04-06 14:47:10] Preparing to unpack .../140-libwebpdemux2_0.6.1-2ubuntu0.20.04.1_amd64.deb ...

[2022-04-06 14:47:10] Unpacking libwebpdemux2:amd64 (0.6.1-2ubuntu0.20.04.1) ...

[2022-04-06 14:47:10] Selecting previously unselected package libwebpmux3:amd64.

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[2022-04-06 14:47:11] Selecting previously unselected package libzstd-dev:amd64.

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[2022-04-06 14:47:11] Selecting previously unselected package pandoc-data.

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[2022-04-06 14:47:12] Selecting previously unselected package libproj-dev:amd64.

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[2022-04-06 14:47:18] Setting up autoconf (2.69-11.1) ...

[2022-04-06 14:47:18] Setting up libgit2-dev:amd64 (0.28.4+dfsg.1-2) ...

[2022-04-06 14:47:18] Setting up automake (1:1.16.1-4ubuntu6) ...

[2022-04-06 14:47:18] update-alternatives: using /usr/bin/automake-1.16 to provide /usr/bin/automake (automake) in auto mode

[2022-04-06 14:47:18] update-alternatives: warning: skip creation of /usr/share/man/man1/automake.1.gz because associated file /usr/share/man/man1/automake-1.16.1.gz (of link group automake) doesn't exist

[2022-04-06 14:47:18] update-alternatives: warning: skip creation of /usr/share/man/man1/aclocal.1.gz because associated file /usr/share/man/man1/aclocal-1.16.1.gz (of link group automake) doesn't exist

[2022-04-06 14:47:18] Setting up libfile-fcntllock-perl (0.22-3build4) ...

[2022-04-06 14:47:18] Setting up liberror-perl (0.17029-1) ...

[2022-04-06 14:47:18] Setting up libarmadillo-dev (1:9.800.4+dfsg-1build1) ...

[2022-04-06 14:47:18] Setting up libltdl-dev:amd64 (2.4.6-14) ...

[2022-04-06 14:47:18] Setting up libhdf4-alt-dev (4.2.14-1ubuntu1) ...

[2022-04-06 14:47:18] Setting up pkg-config (0.29.1-0ubuntu4) ...

[2022-04-06 14:47:18] Setting up git (1:2.25.1-1ubuntu3.2) ...

[2022-04-06 14:47:18] Setting up libdap-dev:amd64 (3.20.5-1) ...

[2022-04-06 14:47:18] Setting up odbcinst (2.3.6-0.1build1) ...

[2022-04-06 14:47:18] Setting up odbcinst1debian2:amd64 (2.3.6-0.1build1) ...

[2022-04-06 14:47:18] Setting up unixodbc-dev:amd64 (2.3.6-0.1build1) ...

[2022-04-06 14:47:18] Setting up libgdal26 (3.0.4+dfsg-1build3) ...

[2022-04-06 14:47:18] Setting up libgdal-dev (3.0.4+dfsg-1build3) ...

[2022-04-06 14:47:18] Setting up python3-gdal (3.0.4+dfsg-1build3) ...

[2022-04-06 14:47:18] Setting up gdal-bin (3.0.4+dfsg-1build3) ...

[2022-04-06 14:47:19] Processing triggers for fontconfig (2.13.1-2ubuntu3) ...

[2022-04-06 14:47:19] Processing triggers for mime-support (3.64ubuntu1) ...

[2022-04-06 14:47:19] Processing triggers for libc-bin (2.31-0ubuntu9.7) ...

[2022-04-06 14:47:27] Removing intermediate container a25a070999bd

[2022-04-06 14:47:27] ---> d0807d59b8c0

[2022-04-06 14:47:27] Step 3/20 : RUN echo "options(repos = c(CRAN = 'https://cran.rstudio.com/'), download.file.method = 'libcurl', Ncpus = 4)" >> /usr/local/lib/R/etc/Rprofile.site

[2022-04-06 14:47:27] ---> Running in 7642838465a6

[2022-04-06 14:47:27] Removing intermediate container 7642838465a6

[2022-04-06 14:47:27] ---> b4b30639f05a

[2022-04-06 14:47:27] Step 4/20 : RUN R -e 'install.packages("remotes")'

[2022-04-06 14:47:27] ---> Running in 3265be830282

[2022-04-06 14:47:27]

[2022-04-06 14:47:27] R version 4.1.3 (2022-03-10) -- "One Push-Up"

[2022-04-06 14:47:27] Platform: x86_64-pc-linux-gnu (64-bit)

[2022-04-06 14:47:27]

[2022-04-06 14:47:27] R is free software and comes with ABSOLUTELY NO WARRANTY.

[2022-04-06 14:47:27] You are welcome to redistribute it under certain conditions.

[2022-04-06 14:47:27] Type 'license()' or 'licence()' for distribution details.

[2022-04-06 14:47:27]

[2022-04-06 14:47:27] Natural language support but running in an English locale

[2022-04-06 14:47:27]

[2022-04-06 14:47:27] R is a collaborative project with many contributors.

[2022-04-06 14:47:27] Type 'contributors()' for more information and

[2022-04-06 14:47:27] 'citation()' on how to cite R or R packages in publications.

[2022-04-06 14:47:27]

[2022-04-06 14:47:27] Type 'demo()' for some demos, 'help()' for on-line help, or

[2022-04-06 14:47:27] 'help.start()' for an HTML browser interface to help.

[2022-04-06 14:47:27] Type 'q()' to quit R.

[2022-04-06 14:47:27]

[2022-04-06 14:47:27] > install.packages("remotes")

[2022-04-06 14:47:27] Installing package into ‘/usr/local/lib/R/site-library’

[2022-04-06 14:47:27] (as ‘lib’ is unspecified)

[2022-04-06 14:47:32] trying URL 'https://cran.rstudio.com/src/contrib/remotes_2.4.2.tar.gz'

[2022-04-06 14:47:32] Content type 'application/x-gzip' length 152540 bytes (148 KB)

[2022-04-06 14:47:32] ==================================================

[2022-04-06 14:47:32] downloaded 148 KB

[2022-04-06 14:47:32]

[2022-04-06 14:47:32] * installing *source* package ‘remotes’ ...

[2022-04-06 14:47:32] ** package ‘remotes’ successfully unpacked and MD5 sums checked

[2022-04-06 14:47:32] ** using staged installation

[2022-04-06 14:47:32] ** R

[2022-04-06 14:47:32] ** inst

[2022-04-06 14:47:32] ** byte-compile and prepare package for lazy loading

[2022-04-06 14:47:34] ** help

[2022-04-06 14:47:34] *** installing help indices

[2022-04-06 14:47:34] ** building package indices

[2022-04-06 14:47:34] ** installing vignettes

[2022-04-06 14:47:34] ** testing if installed package can be loaded from temporary location

[2022-04-06 14:47:34] ** testing if installed package can be loaded from final location

[2022-04-06 14:47:34] ** testing if installed package keeps a record of temporary installation path

[2022-04-06 14:47:34] * DONE (remotes)

[2022-04-06 14:47:34]

[2022-04-06 14:47:34] The downloaded source packages are in

[2022-04-06 14:47:34] ‘/tmp/Rtmpv4xM5C/downloaded_packages’

[2022-04-06 14:47:34] >

[2022-04-06 14:47:35] Removing intermediate container 3265be830282

[2022-04-06 14:47:35] ---> bd8cb3a1c1af

[2022-04-06 14:47:35] Step 5/20 : RUN Rscript -e 'remotes::install_version("tibble",upgrade="never", version = "3.1.6")'

[2022-04-06 14:47:35] ---> Running in be8c618656d5

[2022-04-06 14:47:37] Downloading package from url: https://cran.rstudio.com/src/contrib/tibble_3.1.6.tar.gz

[2022-04-06 14:47:40] Installing 12 packages: rlang, glue, cli, vctrs, utf8, lifecycle, fansi, ellipsis, crayon, pkgconfig, pillar, magrittr

[2022-04-06 14:47:40] Installing packages into ‘/usr/local/lib/R/site-library’

[2022-04-06 14:47:40] (as ‘lib’ is unspecified)

[2022-04-06 14:47:40] trying URL 'https://cran.rstudio.com/src/contrib/rlang_1.0.2.tar.gz'

[2022-04-06 14:47:41] Content type 'application/x-gzip' length 724829 bytes (707 KB)

[2022-04-06 14:47:42] ==================================================

[2022-04-06 14:47:42] downloaded 707 KB

[2022-04-06 14:47:42]

[2022-04-06 14:47:42] trying URL 'https://cran.rstudio.com/src/contrib/glue_1.6.2.tar.gz'

[2022-04-06 14:47:43] Content type 'application/x-gzip' length 106510 bytes (104 KB)

[2022-04-06 14:47:43] ==================================================

[2022-04-06 14:47:43] downloaded 104 KB

[2022-04-06 14:47:43]

[2022-04-06 14:47:43] trying URL 'https://cran.rstudio.com/src/contrib/cli_3.2.0.tar.gz'

[2022-04-06 14:47:43] Content type 'application/x-gzip' length 493192 bytes (481 KB)

[2022-04-06 14:47:44] ==================================================

[2022-04-06 14:47:44] downloaded 481 KB

[2022-04-06 14:47:44]

[2022-04-06 14:47:44] trying URL 'https://cran.rstudio.com/src/contrib/vctrs_0.4.0.tar.gz'

[2022-04-06 14:47:45] Content type 'application/x-gzip' length 916665 bytes (895 KB)

[2022-04-06 14:47:46] ==================================================

[2022-04-06 14:47:46] downloaded 895 KB

[2022-04-06 14:47:46]

[2022-04-06 14:47:46] trying URL 'https://cran.rstudio.com/src/contrib/utf8_1.2.2.tar.gz'

[2022-04-06 14:47:47] Content type 'application/x-gzip' length 240327 bytes (234 KB)

[2022-04-06 14:47:48] ==================================================

[2022-04-06 14:47:48] downloaded 234 KB

[2022-04-06 14:47:48]

[2022-04-06 14:47:48] trying URL 'https://cran.rstudio.com/src/contrib/lifecycle_1.0.1.tar.gz'

[2022-04-06 14:47:49] Content type 'application/x-gzip' length 99716 bytes (97 KB)

[2022-04-06 14:47:49] ==================================================

[2022-04-06 14:47:49] downloaded 97 KB

[2022-04-06 14:47:49]

[2022-04-06 14:47:49] trying URL 'https://cran.rstudio.com/src/contrib/fansi_1.0.3.tar.gz'

[2022-04-06 14:47:50] Content type 'application/x-gzip' length 481163 bytes (469 KB)

[2022-04-06 14:47:50] ==================================================

[2022-04-06 14:47:50] downloaded 469 KB

[2022-04-06 14:47:50]

[2022-04-06 14:47:50] trying URL 'https://cran.rstudio.com/src/contrib/ellipsis_0.3.2.tar.gz'

[2022-04-06 14:47:51] Content type 'application/x-gzip' length 8066 bytes

[2022-04-06 14:47:51] ==================================================

[2022-04-06 14:47:51] downloaded 8066 bytes

[2022-04-06 14:47:51]

[2022-04-06 14:47:51] trying URL 'https://cran.rstudio.com/src/contrib/crayon_1.5.1.tar.gz'

[2022-04-06 14:47:52] Content type 'application/x-gzip' length 40178 bytes (39 KB)

[2022-04-06 14:47:52] ==================================================

[2022-04-06 14:47:52] downloaded 39 KB

[2022-04-06 14:47:52]

[2022-04-06 14:47:52] trying URL 'https://cran.rstudio.com/src/contrib/pkgconfig_2.0.3.tar.gz'

[2022-04-06 14:48:00] Content type 'application/x-gzip' length 6080 bytes

[2022-04-06 14:48:00] ==================================================

[2022-04-06 14:48:00] downloaded 6080 bytes

[2022-04-06 14:48:00]

[2022-04-06 14:48:00] trying URL 'https://cran.rstudio.com/src/contrib/pillar_1.7.0.tar.gz'

[2022-04-06 14:48:01] Content type 'application/x-gzip' length 529668 bytes (517 KB)

[2022-04-06 14:48:02] ==================================================

[2022-04-06 14:48:02] downloaded 517 KB

[2022-04-06 14:48:02]

[2022-04-06 14:48:02] trying URL 'https://cran.rstudio.com/src/contrib/magrittr_2.0.3.tar.gz'

[2022-04-06 14:48:03] Content type 'application/x-gzip' length 267074 bytes (260 KB)

[2022-04-06 14:48:03] ==================================================

[2022-04-06 14:48:03] downloaded 260 KB

[2022-04-06 14:48:03]

[2022-04-06 14:48:04] begin installing package ‘rlang’

[2022-04-06 14:48:04] begin installing package ‘glue’

[2022-04-06 14:48:04] begin installing package ‘utf8’

[2022-04-06 14:48:04] begin installing package ‘fansi’

[2022-04-06 14:48:06] * installing *source* package ‘glue’ ...

[2022-04-06 14:48:06] ** package ‘glue’ successfully unpacked and MD5 sums checked

[2022-04-06 14:48:06] ** using staged installation

[2022-04-06 14:48:06] ** libs

[2022-04-06 14:48:06] make[1]: Entering directory '/tmp/RtmpOKfBTC/R.INSTALL62390213c0/glue/src'

[2022-04-06 14:48:06] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c glue.c -o glue.o

[2022-04-06 14:48:06] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o

[2022-04-06 14:48:06] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c trim.c -o trim.o

[2022-04-06 14:48:06] gcc -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o glue.so glue.o init.o trim.o -L/usr/local/lib/R/lib -lR

[2022-04-06 14:48:06] make[1]: Leaving directory '/tmp/RtmpOKfBTC/R.INSTALL62390213c0/glue/src'

[2022-04-06 14:48:06] installing to /usr/local/lib/R/site-library/00LOCK-glue/00new/glue/libs

[2022-04-06 14:48:06] ** R

[2022-04-06 14:48:06] ** inst

[2022-04-06 14:48:06] ** byte-compile and prepare package for lazy loading

[2022-04-06 14:48:06] ** help

[2022-04-06 14:48:06] *** installing help indices

[2022-04-06 14:48:06] *** copying figures

[2022-04-06 14:48:06] ** building package indices

[2022-04-06 14:48:06] ** installing vignettes

[2022-04-06 14:48:06] ** testing if installed package can be loaded from temporary location

[2022-04-06 14:48:06] ** checking absolute paths in shared objects and dynamic libraries

[2022-04-06 14:48:06] ** testing if installed package can be loaded from final location

[2022-04-06 14:48:06] ** testing if installed package keeps a record of temporary installation path

[2022-04-06 14:48:06] * DONE (glue)

[2022-04-06 14:48:06] begin installing package ‘crayon’

[2022-04-06 14:48:08] * installing *source* package ‘crayon’ ...

[2022-04-06 14:48:08] ** package ‘crayon’ successfully unpacked and MD5 sums checked

[2022-04-06 14:48:08] ** using staged installation

[2022-04-06 14:48:08] ** R

[2022-04-06 14:48:08] ** byte-compile and prepare package for lazy loading

[2022-04-06 14:48:08] ** help

[2022-04-06 14:48:08] *** installing help indices

[2022-04-06 14:48:08] ** building package indices

[2022-04-06 14:48:08] ** testing if installed package can be loaded from temporary location

[2022-04-06 14:48:08] ** testing if installed package can be loaded from final location

[2022-04-06 14:48:08] ** testing if installed package keeps a record of temporary installation path

[2022-04-06 14:48:08] * DONE (crayon)

[2022-04-06 14:48:08] begin installing package ‘pkgconfig’

[2022-04-06 14:48:08] * installing *source* package ‘utf8’ ...

[2022-04-06 14:48:08] ** package ‘utf8’ successfully unpacked and MD5 sums checked

[2022-04-06 14:48:08] ** using staged installation

[2022-04-06 14:48:08] ** libs

[2022-04-06 14:48:08] make[1]: Entering directory '/tmp/RtmpXXX7PT/R.INSTALL6654796a9/utf8/src'

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c as_utf8.c -o as_utf8.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bytes.c -o bytes.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c context.c -o context.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c render.c -o render.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c render_table.c -o render_table.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c string.c -o string.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c text.c -o text.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8_encode.c -o utf8_encode.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8_format.c -o utf8_format.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8_normalize.c -o utf8_normalize.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8_valid.c -o utf8_valid.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8_width.c -o utf8_width.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c util.c -o util.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/array.c -o utf8lite/src/array.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/char.c -o utf8lite/src/char.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/encode.c -o utf8lite/src/encode.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/error.c -o utf8lite/src/error.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/escape.c -o utf8lite/src/escape.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/graph.c -o utf8lite/src/graph.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/graphscan.c -o utf8lite/src/graphscan.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/normalize.c -o utf8lite/src/normalize.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/render.c -o utf8lite/src/render.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/text.c -o utf8lite/src/text.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/textassign.c -o utf8lite/src/textassign.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/textiter.c -o utf8lite/src/textiter.o

[2022-04-06 14:48:08] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -Iutf8lite/src -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8lite/src/textmap.c -o utf8lite/src/textmap.o

[2022-04-06 14:48:08] ar rcs libcutf8lite.a utf8lite/src/array.o utf8lite/src/char.o utf8lite/src/encode.o utf8lite/src/error.o utf8lite/src/escape.o utf8lite/src/graph.o utf8lite/src/graphscan.o utf8lite/src/normalize.o utf8lite/src/render.o utf8lite/src/text.o utf8lite/src/textassign.o utf8lite/src/textiter.o utf8lite/src/textmap.o

[2022-04-06 14:48:08] gcc -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o utf8.so as_utf8.o bytes.o context.o init.o render.o render_table.o string.o text.o utf8_encode.o utf8_format.o utf8_normalize.o utf8_valid.o utf8_width.o util.o -L. -lcutf8lite -L/usr/local/lib/R/lib -lR

[2022-04-06 14:48:08] make[1]: Leaving directory '/tmp/RtmpXXX7PT/R.INSTALL6654796a9/utf8/src'

[2022-04-06 14:48:08] installing to /usr/local/lib/R/site-library/00LOCK-utf8/00new/utf8/libs

[2022-04-06 14:48:08] ** R

[2022-04-06 14:48:08] ** inst

[2022-04-06 14:48:08] ** byte-compile and prepare package for lazy loading

[2022-04-06 14:48:08] ** help

[2022-04-06 14:48:08] *** installing help indices

[2022-04-06 14:48:08] ** building package indices

[2022-04-06 14:48:08] ** installing vignettes

[2022-04-06 14:48:08] ** testing if installed package can be loaded from temporary location

[2022-04-06 14:48:08] ** checking absolute paths in shared objects and dynamic libraries

[2022-04-06 14:48:08] ** testing if installed package can be loaded from final location

[2022-04-06 14:48:08] ** testing if installed package keeps a record of temporary installation path

[2022-04-06 14:48:08] * DONE (utf8)

[2022-04-06 14:48:08] begin installing package ‘magrittr’

[2022-04-06 14:48:09] * installing *source* package ‘fansi’ ...

[2022-04-06 14:48:09] ** package ‘fansi’ successfully unpacked and MD5 sums checked

[2022-04-06 14:48:09] ** using staged installation

[2022-04-06 14:48:09] ** libs

[2022-04-06 14:48:09] make[1]: Entering directory '/tmp/RtmpsjblOc/R.INSTALL6a6283ff83/fansi/src'

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c assumptions.c -o assumptions.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c carry.c -o carry.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c has.c -o has.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c nchar.c -o nchar.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c normalize.c -o normalize.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c read.c -o read.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rnchar.c -o rnchar.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c state.c -o state.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c strip.c -o strip.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c substr.c -o substr.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tabs.c -o tabs.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tohtml.c -o tohtml.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c trimws.c -o trimws.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c unhandled.c -o unhandled.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8.c -o utf8.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.c -o utils.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c wrap.c -o wrap.o

[2022-04-06 14:48:09] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c write.c -o write.o

[2022-04-06 14:48:09] gcc -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o fansi.so assumptions.o carry.o has.o init.o nchar.o normalize.o read.o rnchar.o state.o strip.o substr.o tabs.o tohtml.o trimws.o unhandled.o utf8.o utils.o wrap.o write.o -L/usr/local/lib/R/lib -lR

[2022-04-06 14:48:09] make[1]: Leaving directory '/tmp/RtmpsjblOc/R.INSTALL6a6283ff83/fansi/src'

[2022-04-06 14:48:09] installing to /usr/local/lib/R/site-library/00LOCK-fansi/00new/fansi/libs

[2022-04-06 14:48:09] ** R

[2022-04-06 14:48:09] ** inst

[2022-04-06 14:48:09] ** byte-compile and prepare package for lazy loading

[2022-04-06 14:48:09] ** help

[2022-04-06 14:48:09] *** installing help indices

[2022-04-06 14:48:09] ** building package indices

[2022-04-06 14:48:09] ** installing vignettes

[2022-04-06 14:48:09] ** testing if installed package can be loaded from temporary location

[2022-04-06 14:48:09] ** checking absolute paths in shared objects and dynamic libraries

[2022-04-06 14:48:09] ** testing if installed package can be loaded from final location

[2022-04-06 14:48:09] ** testing if installed package keeps a record of temporary installation path

[2022-04-06 14:48:09] * DONE (fansi)

[2022-04-06 14:48:09] begin installing package ‘cli’

[2022-04-06 14:48:09] * installing *source* package ‘pkgconfig’ ...

[2022-04-06 14:48:09] ** package ‘pkgconfig’ successfully unpacked and MD5 sums checked

[2022-04-06 14:48:09] ** using staged installation

[2022-04-06 14:48:09] ** R

[2022-04-06 14:48:09] ** inst

[2022-04-06 14:48:09] ** byte-compile and prepare package for lazy loading

[2022-04-06 14:48:09] ** help

[2022-04-06 14:48:09] *** installing help indices

[2022-04-06 14:48:09] ** building package indices

[2022-04-06 14:48:09] ** testing if installed package can be loaded from temporary location

[2022-04-06 14:48:09] ** testing if installed package can be loaded from final location

[2022-04-06 14:48:09] ** testing if installed package keeps a record of temporary installation path

[2022-04-06 14:48:09] * DONE (pkgconfig)

[2022-04-06 14:48:10] * installing *source* package ‘magrittr’ ...

[2022-04-06 14:48:10] ** package ‘magrittr’ successfully unpacked and MD5 sums checked

[2022-04-06 14:48:10] ** using staged installation

[2022-04-06 14:48:10] ** libs

[2022-04-06 14:48:10] make[1]: Entering directory '/tmp/RtmpSqzpzs/R.INSTALL28b2407bc55/magrittr/src'

[2022-04-06 14:48:10] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c pipe.c -o pipe.o

[2022-04-06 14:48:10] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.c -o utils.o

[2022-04-06 14:48:10] gcc -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o magrittr.so pipe.o utils.o -L/usr/local/lib/R/lib -lR

[2022-04-06 14:48:10] make[1]: Leaving directory '/tmp/RtmpSqzpzs/R.INSTALL28b2407bc55/magrittr/src'

[2022-04-06 14:48:10] installing to /usr/local/lib/R/site-library/00LOCK-magrittr/00new/magrittr/libs

[2022-04-06 14:48:10] ** R

[2022-04-06 14:48:10] ** inst

[2022-04-06 14:48:10] ** byte-compile and prepare package for lazy loading

[2022-04-06 14:48:10] ** help

[2022-04-06 14:48:10] *** installing help indices

[2022-04-06 14:48:10] *** copying figures

[2022-04-06 14:48:10] ** building package indices

[2022-04-06 14:48:10] ** installing vignettes

[2022-04-06 14:48:10] ** testing if installed package can be loaded from temporary location

[2022-04-06 14:48:10] ** checking absolute paths in shared objects and dynamic libraries

[2022-04-06 14:48:10] ** testing if installed package can be loaded from final location

[2022-04-06 14:48:10] ** testing if installed package keeps a record of temporary installation path

[2022-04-06 14:48:10] * DONE (magrittr)

[2022-04-06 14:48:16] * installing *source* package ‘cli’ ...

[2022-04-06 14:48:16] ** package ‘cli’ successfully unpacked and MD5 sums checked

[2022-04-06 14:48:16] ** using staged installation

[2022-04-06 14:48:16] ** libs

[2022-04-06 14:48:16] make[1]: Entering directory '/tmp/Rtmpb0hQon/R.INSTALL30f6ab8aee0/cli/src'

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ansi.c -o ansi.o

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cleancall.c -o cleancall.o

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c diff.c -o diff.o

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c errors.c -o errors.o

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c md5.c -o md5.o

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c progress-altrep.c -o progress-altrep.o

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c progress.c -o progress.o

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c sha256.c -o sha256.o

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c thread.c -o thread.o

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c tty.c -o tty.o

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utf8.c -o utf8.o

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c win-utf8.c -o win-utf8.o

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c winfiles.c -o winfiles.o

[2022-04-06 14:48:16] gcc -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o cli.so ansi.o cleancall.o diff.o errors.o init.o md5.o progress-altrep.o progress.o sha256.o thread.o tty.o utf8.o win-utf8.o winfiles.o -L/usr/local/lib/R/lib -lR

[2022-04-06 14:48:16] make[1]: Leaving directory '/tmp/Rtmpb0hQon/R.INSTALL30f6ab8aee0/cli/src'

[2022-04-06 14:48:16] installing to /usr/local/lib/R/site-library/00LOCK-cli/00new/cli/libs

[2022-04-06 14:48:16] ** R

[2022-04-06 14:48:16] ** inst

[2022-04-06 14:48:16] ** byte-compile and prepare package for lazy loading

[2022-04-06 14:48:16] ** help

[2022-04-06 14:48:16] *** installing help indices

[2022-04-06 14:48:16] *** copying figures

[2022-04-06 14:48:16] ** building package indices

[2022-04-06 14:48:16] ** testing if installed package can be loaded from temporary location

[2022-04-06 14:48:16] ** checking absolute paths in shared objects and dynamic libraries

[2022-04-06 14:48:16] ** testing if installed package can be loaded from final location

[2022-04-06 14:48:16] ** testing if installed package keeps a record of temporary installation path

[2022-04-06 14:48:16] * DONE (cli)

[2022-04-06 14:48:16] * installing *source* package ‘rlang’ ...

[2022-04-06 14:48:16] ** package ‘rlang’ successfully unpacked and MD5 sums checked

[2022-04-06 14:48:16] ** using staged installation

[2022-04-06 14:48:16] ** libs

[2022-04-06 14:48:16] make[1]: Entering directory '/tmp/RtmpmauvCM/R.INSTALL64576d419a/rlang/src'

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c capture.c -o capture.o

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c internal.c -o internal.o

[2022-04-06 14:48:16] g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang/ -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rlang-rcc.cpp -o rlang-rcc.o

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rlang.c -o rlang.o

[2022-04-06 14:48:16] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang/ -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c version.c -o version.o

[2022-04-06 14:48:16] g++ -std=gnu++11 -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o rlang.so capture.o internal.o rlang-rcc.o rlang.o version.o -L/usr/local/lib/R/lib -lR

[2022-04-06 14:48:16] make[1]: Leaving directory '/tmp/RtmpmauvCM/R.INSTALL64576d419a/rlang/src'

[2022-04-06 14:48:16] installing to /usr/local/lib/R/site-library/00LOCK-rlang/00new/rlang/libs

[2022-04-06 14:48:16] ** R

[2022-04-06 14:48:16] ** inst

[2022-04-06 14:48:16] ** byte-compile and prepare package for lazy loading

[2022-04-06 14:48:16] ** help

[2022-04-06 14:48:16] *** installing help indices

[2022-04-06 14:48:16] *** copying figures

[2022-04-06 14:48:16] ** building package indices

[2022-04-06 14:48:16] ** testing if installed package can be loaded from temporary location

[2022-04-06 14:48:16] ** checking absolute paths in shared objects and dynamic libraries

[2022-04-06 14:48:16] ** testing if installed package can be loaded from final location

[2022-04-06 14:48:16] ** testing if installed package keeps a record of temporary installation path

[2022-04-06 14:48:16] * DONE (rlang)

[2022-04-06 14:48:16] begin installing package ‘lifecycle’

[2022-04-06 14:48:16] begin installing package ‘ellipsis’

[2022-04-06 14:48:16] begin installing package ‘vctrs’

[2022-04-06 14:48:18] * installing *source* package ‘lifecycle’ ...

[2022-04-06 14:48:18] ** package ‘lifecycle’ successfully unpacked and MD5 sums checked

[2022-04-06 14:48:18] ** using staged installation

[2022-04-06 14:48:18] ** R

[2022-04-06 14:48:18] ** inst

[2022-04-06 14:48:18] ** byte-compile and prepare package for lazy loading

[2022-04-06 14:48:18] ** help

[2022-04-06 14:48:18] *** installing help indices

[2022-04-06 14:48:18] *** copying figures

[2022-04-06 14:48:18] ** building package indices

[2022-04-06 14:48:18] ** installing vignettes

[2022-04-06 14:48:18] ** testing if installed package can be loaded from temporary location

[2022-04-06 14:48:18] ** testing if installed package can be loaded from final location

[2022-04-06 14:48:18] ** testing if installed package keeps a record of temporary installation path

[2022-04-06 14:48:18] * DONE (lifecycle)

[2022-04-06 14:48:18] * installing *source* package ‘ellipsis’ ...

[2022-04-06 14:48:18] ** package ‘ellipsis’ successfully unpacked and MD5 sums checked

[2022-04-06 14:48:18] ** using staged installation

[2022-04-06 14:48:18] ** libs

[2022-04-06 14:48:18] make[1]: Entering directory '/tmp/RtmpipAw1j/R.INSTALL473479f954e/ellipsis/src'

[2022-04-06 14:48:18] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dots.c -o dots.o

[2022-04-06 14:48:18] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o

[2022-04-06 14:48:18] gcc -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o ellipsis.so dots.o init.o -L/usr/local/lib/R/lib -lR

[2022-04-06 14:48:18] make[1]: Leaving directory '/tmp/RtmpipAw1j/R.INSTALL473479f954e/ellipsis/src'

[2022-04-06 14:48:18] installing to /usr/local/lib/R/site-library/00LOCK-ellipsis/00new/ellipsis/libs

[2022-04-06 14:48:18] ** R

[2022-04-06 14:48:18] ** byte-compile and prepare package for lazy loading

[2022-04-06 14:48:18] ** help

[2022-04-06 14:48:18] *** installing help indices

[2022-04-06 14:48:18] ** building package indices

[2022-04-06 14:48:18] ** testing if installed package can be loaded from temporary location

[2022-04-06 14:48:18] ** checking absolute paths in shared objects and dynamic libraries

[2022-04-06 14:48:18] ** testing if installed package can be loaded from final location

[2022-04-06 14:48:18] ** testing if installed package keeps a record of temporary installation path

[2022-04-06 14:48:18] * DONE (ellipsis)

[2022-04-06 14:48:32] * installing *source* package ‘vctrs’ ...

[2022-04-06 14:48:32] ** package ‘vctrs’ successfully unpacked and MD5 sums checked

[2022-04-06 14:48:32] ** using staged installation

[2022-04-06 14:48:32] ** libs

[2022-04-06 14:48:32] make[1]: Entering directory '/tmp/RtmpOwiCnI/R.INSTALL478372a6d3c/vctrs/src'

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c altrep-rle.c -o altrep-rle.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c altrep.c -o altrep.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c arg-counter.c -o arg-counter.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c arg.c -o arg.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c assert.c -o assert.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c bind.c -o bind.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c c-unchop.c -o c-unchop.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c c.c -o c.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c callables.c -o callables.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cast-bare.c -o cast-bare.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cast-dispatch.c -o cast-dispatch.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c cast.c -o cast.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c compare.c -o compare.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c complete.c -o complete.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c conditions.c -o conditions.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dictionary.c -o dictionary.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c dim.c -o dim.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c empty.c -o empty.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c equal.c -o equal.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fields.c -o fields.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c fill.c -o fill.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c globals.c -o globals.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c group.c -o group.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c growable.c -o growable.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c hash.c -o hash.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c interval.c -o interval.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c match-joint.c -o match-joint.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c match.c -o match.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c names.c -o names.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c order-collate.c -o order-collate.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c order-groups.c -o order-groups.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c order-sortedness.c -o order-sortedness.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c order-truelength.c -o order-truelength.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c order.c -o order.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c poly-op.c -o poly-op.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c proxy-restore.c -o proxy-restore.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c proxy.c -o proxy.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ptype-common.c -o ptype-common.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ptype.c -o ptype.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ptype2-dispatch.c -o ptype2-dispatch.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c ptype2.c -o ptype2.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rank.c -o rank.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rep.c -o rep.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rlang-dev.c -o rlang-dev.o

[2022-04-06 14:48:32] g++ -std=gnu++11 -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rlang-rcc.cpp -o rlang-rcc.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c rlang.c -o rlang.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c runs.c -o runs.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c shape.c -o shape.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c size-common.c -o size-common.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c size.c -o size.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c slice-array.c -o slice-array.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c slice-assign-array.c -o slice-assign-array.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c slice-assign.c -o slice-assign.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c slice-chop.c -o slice-chop.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c slice-interleave.c -o slice-interleave.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c slice.c -o slice.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c split.c -o split.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c subscript-loc.c -o subscript-loc.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c subscript.c -o subscript.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c translate.c -o translate.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c type-data-frame.c -o type-data-frame.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c type-date-time.c -o type-date-time.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c type-factor.c -o type-factor.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c type-info.c -o type-info.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c type-integer64.c -o type-integer64.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c type-tibble.c -o type-tibble.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c typeof2-s3.c -o typeof2-s3.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c typeof2.c -o typeof2.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c unspecified.c -o unspecified.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils-dispatch.c -o utils-dispatch.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c utils.c -o utils.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c vctrs-core.c -o vctrs-core.o

[2022-04-06 14:48:32] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I./rlang -I/usr/local/include -fvisibility=hidden -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c version.c -o version.o

[2022-04-06 14:48:32] g++ -std=gnu++11 -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o vctrs.so altrep-rle.o altrep.o arg-counter.o arg.o assert.o bind.o c-unchop.o c.o callables.o cast-bare.o cast-dispatch.o cast.o compare.o complete.o conditions.o dictionary.o dim.o empty.o equal.o fields.o fill.o globals.o group.o growable.o hash.o init.o interval.o match-joint.o match.o names.o order-collate.o order-groups.o order-sortedness.o order-truelength.o order.o poly-op.o proxy-restore.o proxy.o ptype-common.o ptype.o ptype2-dispatch.o ptype2.o rank.o rep.o rlang-dev.o rlang-rcc.o rlang.o runs.o shape.o size-common.o size.o slice-array.o slice-assign-array.o slice-assign.o slice-chop.o slice-interleave.o slice.o split.o subscript-loc.o subscript.o translate.o type-data-frame.o type-date-time.o type-factor.o type-info.o type-integer64.o type-tibble.o typeof2-s3.o typeof2.o unspecified.o utils-dispatch.o utils.o vctrs-core.o version.o -L/usr/local/lib/R/lib -lR

[2022-04-06 14:48:32] make[1]: Leaving directory '/tmp/RtmpOwiCnI/R.INSTALL478372a6d3c/vctrs/src'

[2022-04-06 14:48:32] installing to /usr/local/lib/R/site-library/00LOCK-vctrs/00new/vctrs/libs

[2022-04-06 14:48:32] ** R

[2022-04-06 14:48:32] ** inst

[2022-04-06 14:48:32] ** byte-compile and prepare package for lazy loading

[2022-04-06 14:48:32] ** help

[2022-04-06 14:48:32] *** installing help indices

[2022-04-06 14:48:32] *** copying figures

[2022-04-06 14:48:32] ** building package indices

[2022-04-06 14:48:32] ** installing vignettes

[2022-04-06 14:48:32] ** testing if installed package can be loaded from temporary location

[2022-04-06 14:48:32] ** checking absolute paths in shared objects and dynamic libraries

[2022-04-06 14:48:32] ** testing if installed package can be loaded from final location

[2022-04-06 14:48:32] ** testing if installed package keeps a record of temporary installation path

[2022-04-06 14:48:32] * DONE (vctrs)

[2022-04-06 14:48:32] begin installing package ‘pillar’

[2022-04-06 14:48:35] * installing *source* package ‘pillar’ ...

[2022-04-06 14:48:35] ** package ‘pillar’ successfully unpacked and MD5 sums checked

[2022-04-06 14:48:35] ** using staged installation

[2022-04-06 14:48:35] ** R

[2022-04-06 14:48:35] ** inst

[2022-04-06 14:48:35] ** byte-compile and prepare package for lazy loading

[2022-04-06 14:48:35] ** help

[2022-04-06 14:48:35] *** installing help indices

[2022-04-06 14:48:35] *** copying figures

[2022-04-06 14:48:35] ** building package indices

[2022-04-06 14:48:35] ** installing vignettes

[2022-04-06 14:48:35] ** testing if installed package can be loaded from temporary location

[2022-04-06 14:48:35] ** testing if installed package can be loaded from final location

[2022-04-06 14:48:35] ** testing if installed package keeps a record of temporary installation path

[2022-04-06 14:48:35] * DONE (pillar)

[2022-04-06 14:48:35]

[2022-04-06 14:48:35] The downloaded source packages are in

[2022-04-06 14:48:35] ‘/tmp/RtmpBkkFWG/downloaded_packages’

[2022-04-06 14:48:35] Installing package into ‘/usr/local/lib/R/site-library’

[2022-04-06 14:48:35] (as ‘lib’ is unspecified)

[2022-04-06 14:48:35] * installing *source* package ‘tibble’ ...

[2022-04-06 14:48:35] ** package ‘tibble’ successfully unpacked and MD5 sums checked

[2022-04-06 14:48:35] ** using staged installation

[2022-04-06 14:48:35] ** libs

[2022-04-06 14:48:35] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c attributes.c -o attributes.o

[2022-04-06 14:48:35] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c coerce.c -o coerce.o

[2022-04-06 14:48:35] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c init.c -o init.o

[2022-04-06 14:48:35] gcc -I"/usr/local/lib/R/include" -DNDEBUG -I/usr/local/include -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wdate-time -D_FORTIFY_SOURCE=2 -g -c matrixToDataFrame.c -o matrixToDataFrame.o

[2022-04-06 14:48:35] gcc -shared -L/usr/local/lib/R/lib -L/usr/local/lib -o tibble.so attributes.o coerce.o init.o matrixToDataFrame.o -L/usr/local/lib/R/lib -lR

[2022-04-06 14:48:35] installing to /usr/local/lib/R/site-library/00LOCK-tibble/00new/tibble/libs

[2022-04-06 14:48:35] ** R

[2022-04-06 14:48:35] ** inst

[2022-04-06 14:48:35] ** byte-compile and prepare package for lazy loading

[2022-04-06 14:48:37] ** help

[2022-04-06 14:48:37] *** installing help indices

[2022-04-06 14:48:37] *** copying figures

[2022-04-06 14:48:37] ** building package indices

[2022-04-06 14:48:37] ** installing vignettes

[2022-04-06 14:48:37] ** testing if installed package can be loaded from temporary location

[2022-04-06 14:48:38] ** checking absolute paths in shared objects and dynamic libraries

[2022-04-06 14:48:38] ** testing if installed package can be loaded from final location

[2022-04-06 14:48:38] ** testing if installed package keeps a record of temporary installation path

[2022-04-06 14:48:38] * DONE (tibble)

[2022-04-06 14:48:39] Removing intermediate container be8c618656d5

[2022-04-06 14:48:39] ---> c09434ee0a8f

[2022-04-06 14:48:39] Step 6/20 : RUN Rscript -e 'remotes::install_version("pkgload",upgrade="never", version = "1.2.4")'

[2022-04-06 14:48:39] ---> Running in 7b1cc2843ce3

[2022-04-06 14:48:42] Downloading package from url: https://cran.rstudio.com/src/contrib/pkgload_1.2.4.tar.gz

[2022-04-06 14:48:43] Installing 5 packages: rprojroot, R6, withr, rstudioapi, desc

[2022-04-06 14:48:43] Installing packages into ‘/usr/local/lib/R/site-library’

[2022-04-06 14:48:43] (as ‘lib’ is unspecified)

[2022-04-06 14:48:44] trying URL 'https://cran.rstudio.com/src/contrib/rprojroot_2.0.3.tar.gz'

[2022-04-06 14:48:44] Sending interrupt signal to process

[2022-04-06 14:48:44] Aborted by coding

[2022-04-06 14:48:44] Terminated

[2022-04-06 14:48:44] script returned exit code 143

[2022-04-06 14:48:44] [Pipeline] }

[2022-04-06 14:48:44] [Pipeline] // stage

[2022-04-06 14:48:44] [Pipeline] stage

[2022-04-06 14:48:44] [Pipeline] { (推送 Docker 镜像到 TCR)

[2022-04-06 14:48:44] Stage "推送 Docker 镜像到 TCR" skipped due to earlier failure(s)

[2022-04-06 14:48:44] [Pipeline] }

[2022-04-06 14:48:44] [Pipeline] // stage

[2022-04-06 14:48:44] [Pipeline] }

[2022-04-06 14:48:44] [Pipeline] // node

[2022-04-06 14:48:44] [Pipeline] End of Pipeline

[2022-04-06 14:48:44] Finished: ABORTED

***

-----------构建covid-sh-001-----------

2022-04-06 14:38:40 create_version_describe_cluster : succ,

2022-04-06 14:38:40 create_version_check_vpc : succ,

2022-04-06 14:38:43 check_build_image : process, ,

-----------服务covid-sh部署covid-sh-001-----------

2022-04-06 14:38:43 create_build_image : succ,

日志显示成功的呀，什么问题？

最后一次编辑于 2022-04-06

置顶我用R语言做的后端，项目自动生成的Dockerfile，但是在云托管上部署出错，能麻烦工程师看一吗？精选热门

请选择投诉理由

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